RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ARG2P78540 354 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 ARF1P84077 181 aaKnown RBP8.15□□□□□ -1.11
PTPRA-204ENST00000380393 TCTEX1D4Q5JR98 221 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 KCNIP4Q6PIL6 250 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 HSD11B1LQ7Z5J1 315 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 Q8N976 141 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 MRPL43Q8N983 215 aaKnown RBP8.15□□□□□ -1.11
PTPRA-204ENST00000380393 OR52E2Q8NGJ4 325 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 ULBP3Q9BZM4 244 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 CLEC1BQ9P126 229 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 TAC3Q9UHF0 121 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 GPR132Q9UNW8 380 aa8.15□□□□□ -1.11
PTPRA-204ENST00000380393 DOCK11Q5JSL3 2073 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 TRAV27A0A087WT01 109 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.14□□□□□ -1.11
PTPRA-204ENST00000380393 SSR2P43308 183 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 AGERQ15109 404 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 RAB30Q15771 203 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 CSNK1A1LQ8N752 337 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 CHRDL1Q9BU40 450 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 CALHM2Q9HA72 323 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 PEF1Q9UBV8 284 aaKnown RBP8.14□□□□□ -1.11
PTPRA-204ENST00000380393 MYO16Q9Y6X6 1858 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 C1QTNF3-AMACRE9PGA6 284 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 M0R1X1 148 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 TSPAN13O95857 204 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 IL3RAP26951 378 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 LCN6P62502 163 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF154Q13106 437 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 PHF19Q5T6S3 580 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 GPR157Q5UAW9 335 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 OR4F17Q8NGA8 305 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 OR51A4Q8NGJ6 313 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 OR4K13Q8NH42 304 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 OR4F4Q96R69 305 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 PLA2G3Q9NZ20 509 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 TNFRSF18Q9Y5U5 241 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 TRBV5-5A0A0J9YX44 114 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 THY1P04216 161 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 KITLGP21583 273 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 GUCA1AP43080 201 aaPredicted RBP8.14□□□□□ -1.11
PTPRA-204ENST00000380393 HSD52Q0P140 79 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 TCEA2Q15560 299 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF776Q68DI1 518 aaPredicted RBP8.14□□□□□ -1.11
PTPRA-204ENST00000380393 DEFB125Q8N687 156 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 DCAF4L2Q8NA75 395 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 PFN4Q8NHR9 129 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF681Q96N22 645 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 GLIPR2Q9H4G4 154 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 CCL26Q9Y258 94 aa8.14□□□□□ -1.11
PTPRA-204ENST00000380393 MYOFQ9NZM1 2061 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 OR6C6A6NF89 314 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 FBLL1A6NHQ2 334 aaKnown RBP8.13□□□□□ -1.11
PTPRA-204ENST00000380393 NUDT3O95989 172 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 CTSEP14091 401 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 ADMP35318 185 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 RPL15P61313 204 aaKnown RBP8.13□□□□□ -1.11
PTPRA-204ENST00000380393 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
PTPRA-204ENST00000380393 TRMT12Q53H54 448 aaKnown RBP8.13□□□□□ -1.11
PTPRA-204ENST00000380393 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 FAM46BQ96A09 425 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 WDYHV1Q96HA8 205 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 GPR84Q9NQS5 396 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 C20orf141Q9NUB4 165 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 MUC21A0A0G2JKD1 596 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 MUC21A0A140T8X8 626 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 POU2F2P09086 479 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 BCL2P10415 239 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 CRISP2P16562 243 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 MUC21Q5SSG8 566 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 GLYATL3Q5SZD4 288 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 CHRDL2Q6WN34 429 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 PLD4Q96BZ4 506 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 ABHD17AQ96GS6 310 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 EAF1Q96JC9 268 aaPredicted RBP8.13□□□□□ -1.11
PTPRA-204ENST00000380393 TSPAN32Q96QS1 320 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 ZDHHC11Q9H8X9 412 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 TP53TG3Q9ULZ0 132 aa8.13□□□□□ -1.11
PTPRA-204ENST00000380393 NSG1A0A0A6YYJ2 146 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 CEBPZOSA8MTT3 80 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 SLC31A1O15431 190 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 ST8SIA3O43173 380 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF253O75346 499 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF217O75362 1048 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 C1orf105O95561 183 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 HLA-HP01893 362 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 CCKBRP32239 447 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 LINC00310P59036 64 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 PET117Q6UWS5 81 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 ZNF665Q9H7R5 613 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 NPVFQ9HCQ7 196 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 C1orf123Q9NWV4 160 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 RARRES3Q9UL19 164 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 PLXNB3Q9ULL4 1909 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 NOTCH4Q99466 2003 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 NUP210LQ5VU65 1888 aa8.12□□□□□ -1.11
PTPRA-204ENST00000380393 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms