RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 OOEPA6NGQ2 149 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 RHBDL1O75783 438 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 GYPAP02724 150 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 NPBWR2P48146 333 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 VEGFCP49767 419 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
PRPF18-202ENST00000378572 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 ARL6IP1Q15041 203 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 PYDC2Q56P42 97 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 WDR82Q6UXN9 313 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 LINC00596Q86U02 117 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 ST8SIA4Q92187 359 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 LHX4Q969G2 390 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 NRIP2Q9BQI9 281 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 NICN1Q9BSH3 213 aa11.33□□□□□ -0.6
PRPF18-202ENST00000378572 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRPF18-202ENST00000378572 TRAV18A0A075B6X5 111 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 IGHV3OR15-7A0A075B7D8 119 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 H3BUI4 141 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 GSTZ1O43708 216 aaPredicted RBP11.32□□□□□ -0.6
PRPF18-202ENST00000378572 UPK1BO75841 260 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 BPIFB3P59826 476 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 MOGAT2Q3SYC2 334 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 ZNF841Q6ZN19 808 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 ZNF826PQ6ZT77 177 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 PDZD9Q8IXQ8 264 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 IZUMO1Q8IYV9 350 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 Q8N402 240 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 SMIM4Q8WVI0 70 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 AUNIPQ9H7T9 357 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 HES4Q9HCC6 221 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
PRPF18-202ENST00000378572 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 MRPS7Q9Y2R9 242 aaKnown RBP11.32□□□□□ -0.6
PRPF18-202ENST00000378572 A0A1B0GUS0 222 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 GABARAPH6UMI1 98 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 SULT1C2O00338 296 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 LIPFP07098 398 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 MELTFP08582 738 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 GSTP1P09211 210 aaKnown RBP11.32□□□□□ -0.6
PRPF18-202ENST00000378572 TMEM50BP56557 158 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 SRSF4Q08170 494 aaKnown RBP11.32□□□□□ -0.6
PRPF18-202ENST00000378572 ZNF260Q3ZCT1 412 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 Q6YL49 198 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 DTX3Q8N9I9 347 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 WFDC12Q8WWY7 111 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 SCPEP1Q9HB40 452 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 ONECUT1Q9UBC0 465 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 HSF4Q9ULV5 492 aa11.32□□□□□ -0.6
PRPF18-202ENST00000378572 F8VVB4 439 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 F8VWA3 439 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 SOCS1O15524 211 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 NDUFA2O43678 99 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 HIST1H1DP16402 221 aaKnown RBP11.31□□□□□ -0.6
PRPF18-202ENST00000378572 ARF6P62330 175 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 MADCAM1Q13477 382 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 PDCD1Q15116 288 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 TAF9Q16594 264 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 BAK1Q16611 211 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 HACD4Q5VWC8 232 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 OLFML2AQ68BL7 652 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 SNX29P2Q8IUI4 249 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 EMG1Q92979 244 aaKnown RBP11.31□□□□□ -0.6
PRPF18-202ENST00000378572 RAB3CQ96E17 227 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 TBX15Q96SF7 602 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 RASL12Q9NYN1 266 aa11.31□□□□□ -0.6
PRPF18-202ENST00000378572 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 MFNGO00587 321 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
PRPF18-202ENST00000378572 CA11O75493 328 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 IL7P13232 177 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 PRKACAP17612 351 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 BLVRBP30043 206 aaPredicted RBP11.3□□□□□ -0.6
PRPF18-202ENST00000378572 GMFBP60983 142 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 SSBP1Q04837 148 aaKnown RBP11.3□□□□□ -0.6
PRPF18-202ENST00000378572 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 PIGYQ3MUY2 71 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 PDLIM3Q53GG5 364 aaPredicted RBP11.3□□□□□ -0.6
PRPF18-202ENST00000378572 PLAC9Q5JTB6 97 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 SPIN3Q5JUX0 258 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 SIGIRRQ6IA17 410 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 Q6ZTK2 550 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 FAM90A1Q86YD7 464 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 TRIM63Q969Q1 353 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 ZNF488Q96MN9 340 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 IFT22Q9H7X7 185 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 SEBOXQ9HB31 216 aaPredicted RBP11.3□□□□□ -0.6
PRPF18-202ENST00000378572 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 MMP24Q9Y5R2 645 aa11.3□□□□□ -0.6
PRPF18-202ENST00000378572 SERPINE3A8MV23 424 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms