RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SURF2Q15527 256 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-201ENST00000378156 DCAF12L2Q5VW00 463 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 OR5C1Q8NGR4 320 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 WDR13Q9H1Z4 485 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 CXXC4Q9H2H0 198 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 HS3ST3B1Q9Y662 390 aa13.16□□□□□ -0.3
NPHP4-201ENST00000378156 IGHV1-45A0A0A0MS14 117 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 MED19A0JLT2 244 aaPredicted RBP13.15□□□□□ -0.3
NPHP4-201ENST00000378156 ZNF205O95201 554 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 PAX5Q02548 391 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 HFEQ30201 348 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 FBXW9Q5XUX1 488 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 HES7Q9BYE0 225 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 TTTY12Q9BZ98 90 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 TRBV5-5A0A0J9YX44 114 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 ZNF107Q9UII5 783 aaPredicted RBP13.15□□□□□ -0.3
NPHP4-201ENST00000378156 ZNF835Q9Y2P0 537 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 AMDHD2Q9Y303 409 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 IGKV1D-42A0A075B6H8 117 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 RBFOX3A6NFN3 312 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 ST8SIA5O15466 376 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 FTH1P19P0C7X4 201 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 CXCL2P19875 107 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 BHLHA15Q7RTS1 189 aaPredicted RBP13.15□□□□□ -0.3
NPHP4-201ENST00000378156 ADAD2Q8NCV1 583 aaKnown RBP13.15□□□□□ -0.3
NPHP4-201ENST00000378156 ANGPTL4Q9BY76 406 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 C17orf51A8MQB3 221 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 TCAPO15273 167 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 RECKO95980 971 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 OR5AC1P0C628 307 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 F2RP25116 425 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 DDA1Q9BW61 102 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 MIOXQ9UGB7 285 aa13.15□□□□□ -0.3
NPHP4-201ENST00000378156 TTRP02766 147 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 SPINK2P20155 84 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 TSPO2Q5TGU0 170 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 OR11H4Q8NGC9 324 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 ADIPOR1Q96A54 375 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 NAA60Q9H7X0 242 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 SIRT7Q9NRC8 400 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 A0A1W2PNV4 684 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 SPCS3P61009 180 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 WDR61Q9GZS3 305 aaKnown RBP13.14□□□□□ -0.31
NPHP4-201ENST00000378156 BARX1Q9HBU1 254 aaPredicted RBP13.14□□□□□ -0.31
NPHP4-201ENST00000378156 KLK13Q9UKR3 277 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 PSG11Q9UQ72 335 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 DEFB108AA8MXU0 73 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 FCN1O00602 326 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 SP9P0CG40 484 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 RPS4XP62701 263 aaKnown RBP13.14□□□□□ -0.31
NPHP4-201ENST00000378156 FAM3AP98173 230 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 COL19A1Q14993 1142 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 ATP6V1FQ16864 119 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 ARTNQ5T4W7 220 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 TRAT1Q6PIZ9 186 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 LYG1Q8N1E2 194 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
NPHP4-201ENST00000378156 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 SLC38A11Q08AI6 406 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 HIKESHIQ53FT3 197 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 RND1Q92730 232 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 ANXA10Q9UJ72 324 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 SRCAPQ6ZRS2 3230 aa13.14□□□□□ -0.31
NPHP4-201ENST00000378156 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
NPHP4-201ENST00000378156 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-201ENST00000378156 OR3A1P47881 315 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 TMEM33P57088 247 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 RPL11P62913 178 aaKnown RBP13.13□□□□□ -0.31
NPHP4-201ENST00000378156 IL24Q13007 206 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 FFAR4Q5NUL3 377 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 LINC01590Q5TEZ4 76 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 BTNL3Q6UXE8 466 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 MOB3BQ86TA1 216 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 OR5D13Q8NGL4 314 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 OR2T10Q8NGZ9 312 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 NAT8Q9UHE5 227 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 VSIG4Q9Y279 399 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 ZNF737O75373 536 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 FAM27BQ5VT28 67 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 NEIL1Q96FI4 390 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-201ENST00000378156 POM121L2Q96KW2 1035 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-201ENST00000378156 TINAGQ9UJW2 476 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 SLC45A2Q9UMX9 530 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 CIDEAO60543 219 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 HRASP01112 189 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 LYRM7Q5U5X0 104 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-201ENST00000378156 RTTNQ86VV8 2226 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 CDIPTO14735 213 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 EFEMP2O95967 443 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 Q3ZCU0 254 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms