RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 WNT16Q9UBV4 365 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 NAT8BQ9UHF3 227 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 PILRAQ9UKJ1 303 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 KLK13Q9UKR3 277 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 KCNK7Q9Y2U2 307 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 KLHDC2Q9Y2U9 406 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 DMXL1Q9Y485 3027 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 A0A0U1RQV5 110 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 DBX1A6NMT0 343 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 UPK3AO75631 287 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TOX4O94842 621 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 CFDP00746 253 aaPredicted RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 MYF5P13349 255 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TNFRSF1AP19438 455 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 RPS4Y1P22090 263 aaKnown RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 HNRNPA3P51991 378 aaKnown RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 SSPNQ14714 243 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 PRSS53Q2L4Q9 553 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TEX30Q5JUR7 227 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 C17orf78Q8N4C9 275 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ZBTB34Q8NCN2 500 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ZPLD1Q8TCW7 415 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ADTRPQ96IZ2 230 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ZMAT5Q9UDW3 170 aaKnown RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 MIOXQ9UGB7 285 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ZMIZ1Q9ULJ6 1067 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 GPR132Q9UNW8 380 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 RRP8O43159 456 aaKnown RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 IGKV1D-16P01601 117 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 EPHA8P29322 1005 aaPredicted RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 PMS2P11Q13670 270 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 VMA21Q3ZAQ7 101 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ZNF260Q3ZCT1 412 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 NHLRC3Q5JS37 347 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TSPO2Q5TGU0 170 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 LYZL2Q7Z4W2 148 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 OR11H4Q8NGC9 324 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 WFDC6Q9BQY6 131 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 SLC26A1Q9H2B4 701 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 SLC25A22Q9H936 323 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 HES4Q9HCC6 221 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TMEM9BQ9NQ34 198 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 PITPNC1Q9UKF7 332 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 H3BQ15 152 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 GEMIN2O14893 280 aaKnown RBP7.35□□□□□ -1.23
VPS36-201ENST00000378060 MMP9P14780 707 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 MLF1P58340 268 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 DLK1P80370 383 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PAX5Q02548 391 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 FDX2Q6P4F2 183 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 SSX7Q7RTT5 188 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 OR2Y1Q8NGV0 311 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 ADAMTS17Q8TE56 1095 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 GPR87Q9BY21 358 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 DTX4Q9Y2E6 619 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 ZNF835Q9Y2P0 537 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 ARL2-SNX15V9GYD0 113 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 TRAV17A0A0B4J275 112 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 C19orf67A6NJJ6 358 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PIN1P1O15428 100 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 SPINT1O43278 529 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 FCGR3BO75015 233 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PTBP3O95758 552 aaKnown RBP7.35□□□□□ -1.23
VPS36-201ENST00000378060 NOL4LQ96MY1 436 aaPredicted RBP7.35□□□□□ -1.23
VPS36-201ENST00000378060 RSRP1Q9BUV0 290 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 SH2D2AQ9NP31 389 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PSG11Q9UQ72 335 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 ATP23Q9Y6H3 246 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 ASPMQ8IZT6 3477 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 FCN1O00602 326 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 DAOP14920 347 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PNLIPP16233 465 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 CHRNA7P36544 502 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 GNG4P50150 75 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 SERF2P84101 59 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PLAC9Q5JTB6 97 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 NCMAPQ5T1S8 102 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PRR27Q6MZM9 219 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 GAPTQ8N292 157 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 RFLNBQ8N5W9 214 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 OR5A2Q8NGI9 324 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 ABHD14BQ96IU4 210 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 VPS25Q9BRG1 176 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 PRR13Q9NZ81 148 aa7.35□□□□□ -1.23
VPS36-201ENST00000378060 A0A087X0M5 115 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 A0A1B0GX30 115 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 MED19A0JLT2 244 aaPredicted RBP7.34□□□□□ -1.23
VPS36-201ENST00000378060 M0R1B8 84 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 ATP6V0CP27449 155 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 Q3ZCU0 254 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 ETFRF1Q6IPR1 90 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 SLC36A1Q7Z2H8 476 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 LINC00596Q86U02 117 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 C9orf40Q8IXQ3 194 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 H1FOOQ8IZA3 346 aaPredicted RBP7.34□□□□□ -1.23
VPS36-201ENST00000378060 PUSL1Q8N0Z8 303 aaKnown RBP7.34□□□□□ -1.23
VPS36-201ENST00000378060 OR5D13Q8NGL4 314 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 ZNF721Q8TF20 911 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 RNF2Q99496 336 aa7.34□□□□□ -1.23
VPS36-201ENST00000378060 NUDT16L1Q9BRJ7 211 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms