RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 OSR2Q8N2R0 312 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 OR10G3Q8NGC4 313 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 OXGR1Q96P68 337 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 IL17BQ9UHF5 180 aa13.69□□□□□ -0.22
CKAP4-201ENST00000378026 A0A0U1RQV5 110 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 PPP5D1E7EU14 171 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 MALLQ13021 153 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 ENDOGQ14249 297 aaKnown RBP13.68□□□□□ -0.22
CKAP4-201ENST00000378026 TEX38Q6PEX7 206 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 TPSD1Q9BZJ3 242 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 RBKSQ9H477 322 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 SRD5A3Q9H8P0 318 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 TRBV11-1A0A0K0K1C0 115 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 TLX3O43711 291 aaPredicted RBP13.68□□□□□ -0.22
CKAP4-201ENST00000378026 LCATP04180 440 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 IAPPP10997 89 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 OR1D5P58170 312 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 ZNF726P1Q15940 193 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 PRAMEF20Q5VT98 475 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 NCR3LG1Q68D85 454 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 ZNF385AQ96PM9 386 aaKnown RBP13.68□□□□□ -0.22
CKAP4-201ENST00000378026 SIGLEC12Q96PQ1 595 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 PLK3Q9H4B4 646 aa13.68□□□□□ -0.22
CKAP4-201ENST00000378026 CISD1Q9NZ45 108 aaKnown RBP13.68□□□□□ -0.22
CKAP4-201ENST00000378026 A6NNC1 897 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 ZNHIT1O43257 154 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 IGLV3-1P01715 115 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 SCGB1C1Q8TD33 95 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 TGOLN2O43493 480 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 RPL29P47914 159 aaKnown RBP13.67□□□□□ -0.22
CKAP4-201ENST00000378026 PAX9P55771 341 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 GNB2P62879 340 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 BEND2Q8NDZ0 799 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 RNASEH2CQ8TDP1 164 aaKnown RBP13.67□□□□□ -0.22
CKAP4-201ENST00000378026 Q9N2K0 584 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 CCL28Q9NRJ3 127 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 ZNF407Q9C0G0 2248 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 IGKV1D-13A0A0B4J2D9 117 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 SCTP09683 121 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 METTL15P1P0C7V9 234 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 IGKV1-13P0DP09 117 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 GALR1P47211 349 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 H1FOOQ8IZA3 346 aaPredicted RBP13.67□□□□□ -0.22
CKAP4-201ENST00000378026 MRGPRX4Q96LA9 322 aa13.67□□□□□ -0.22
CKAP4-201ENST00000378026 FER1L5A0AVI2 2057 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
CKAP4-201ENST00000378026 MBP02144 154 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 FASLGP48023 281 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 EXT1Q16394 746 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 MYPOPQ86VE0 399 aaPredicted RBP13.66□□□□□ -0.22
CKAP4-201ENST00000378026 A0A0G2JRQ6 117 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 A0A1B0GUS0 222 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 SPINK2P20155 84 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 CEACAM6P40199 344 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 ID3Q02535 119 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 OR51H1Q8NH63 302 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 PIGCQ92535 297 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 OR5B12Q96R08 314 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 PRSS50Q9UI38 385 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 PIAS3Q9Y6X2 628 aa13.66□□□□□ -0.22
CKAP4-201ENST00000378026 DIDO1Q9BTC0 2240 aaKnown RBP13.65□□□□□ -0.22
CKAP4-201ENST00000378026 H7BYZ3 331 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 GCGP01275 180 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 TCN2P20062 427 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 NPBWR2P48146 333 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 NUBP1P53384 320 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 UCP3P55916 312 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 SRPXP78539 464 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 SHBQ15464 509 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 ZNF705AQ6ZN79 300 aaPredicted RBP13.65□□□□□ -0.22
CKAP4-201ENST00000378026 PLPPR1Q8TBJ4 325 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 M0R143 59 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 NRASP01111 189 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 PFN1P07737 140 aaKnown RBP13.65□□□□□ -0.22
CKAP4-201ENST00000378026 FGF5P12034 268 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 CD33P20138 364 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 BAXQ07812 192 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 IL24Q13007 206 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 KIAA0895LQ68EN5 471 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 BTNL3Q6UXE8 466 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 NEK7Q8TDX7 302 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 SPTSSAQ969W0 71 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 TMEM56Q96MV1 263 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 UCN2Q96RP3 112 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 TMEM56-RWDD3S4R434 201 aa13.65□□□□□ -0.22
CKAP4-201ENST00000378026 LRRC3CA6NJW4 275 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 PDCD6O75340 191 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 TK1P04183 234 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 WNT5AP41221 380 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 KCNMB1Q16558 191 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 HIST3H3Q16695 136 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF774Q6NX45 483 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 TMEM18Q96B42 140 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 TAAR3PQ9P1P4 343 aa13.65□□□□□ -0.23
CKAP4-201ENST00000378026 ZNF737O75373 536 aa13.64□□□□□ -0.23
CKAP4-201ENST00000378026 CEACAM1P13688 526 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms