RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PLCXD3Q63HM9 321 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF818PQ6ZRF7 136 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 RHOVQ96L33 236 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 TP53I11O14683 189 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 HSPA12AO43301 675 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 CHST1O43916 411 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 SOD3P08294 240 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 GPX4P36969 197 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 GAPTQ8N292 157 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 PRSS33Q8NF86 280 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 TVP23CQ96ET8 276 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 UNKLQ9H9P5 680 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 CALHM2Q9HA72 323 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 TREM2Q9NZC2 230 aa12.14□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF292O60281 2723 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF407Q9C0G0 2248 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 AHCTF1Q8WYP5 2266 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 SCTP09683 121 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 FUT3P21217 361 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 RPL23AP62750 156 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF385CQ66K41 422 aaPredicted RBP12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 SLC25A26Q70HW3 274 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 CCDC54Q8NEL0 328 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 NIPSNAP3BQ9BS92 247 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 IGKV1D-13A0A0B4J2D9 117 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF587BE7ETH6 402 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 H3BP45 60 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 HSPB6O14558 160 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 TNFSF12O43508 249 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 VAMP5O95183 116 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 IGKV1-13P0DP09 117 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 FKBP2P26885 142 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 TMEM42Q69YG0 159 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 TMEM211Q6ICI0 200 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 CPNE4Q96A23 557 aaPredicted RBP12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 TMEM56Q96MV1 263 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 SIGLEC12Q96PQ1 595 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 SLC25A31Q9H0C2 315 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 TMEM56-RWDD3S4R434 201 aa12.13□□□□□ -0.47
CLCNKA-202ENST00000375692 A0A087WWC5 75 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 GLIPR1P48060 266 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 PSG4Q00888 419 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 C4orf17Q53FE4 359 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF506Q5JVG8 444 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 CMTM1Q8IZ96 169 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 IL22RA1Q8N6P7 574 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 PLPPR1Q8TBJ4 325 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 HSPB1P04792 205 aaKnown RBP12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 LIFP15018 202 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 FUT6P51993 359 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 EXT1Q16394 746 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 EXTL1Q92935 676 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 TMEM9BQ9NQ34 198 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 CCL28Q9NRJ3 127 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 DKKL1Q9UK85 242 aa12.12□□□□□ -0.47
CLCNKA-202ENST00000375692 DEFA6Q01524 100 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 IZUMO4Q1ZYL8 232 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 PRDM13Q9H4Q3 707 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 GNG13Q9P2W3 67 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 hCG_38984A0A1B0GV85 526 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 OR6C6A6NF89 314 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 FGF5P12034 268 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 PAX9P55771 341 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 SRPXP78539 464 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 ID3Q02535 119 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 NMSQ5H8A3 153 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 OR2T2Q6IF00 324 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 HIST3H2BBQ8N257 126 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 GPR137CQ8N3F9 429 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 OR8G5Q8NG78 346 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 FRZBQ92765 325 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 LRFN3Q9BTN0 628 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 TMEM38BQ9NVV0 291 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 IL36RNQ9UBH0 155 aa12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 C19orf25Q9UFG5 118 aaPredicted RBP12.11□□□□□ -0.47
CLCNKA-202ENST00000375692 A0A087WZY1 265 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 A0A1W2PNU3 283 aaPredicted RBP12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 SEC14L6B5MCN3 397 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 HLA-HP01893 362 aa12.1□□□□□ -0.47
CLCNKA-202ENST00000375692 TRGC1P0CF51 173 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms