RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GPR35Q9HC97 309 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 CRYM-AS1A6NIL9 109 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 THBS3P49746 956 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM178AQ8NBL3 297 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM18Q96B42 140 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 FER1L6-AS2Q96M78 137 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 TXN2Q99757 166 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 CLN8Q9UBY8 286 aa5.71□□□□□ -1.5
SMC1A-202ENST00000375340 SERTM2A0A1B0GWG4 89 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ARSJQ5FYB0 599 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 DOK5Q9P104 306 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 M0R1X1 148 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ISG15P05161 165 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ATP6V0CP27449 155 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 CEBPDP49716 269 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 TPPP2P59282 170 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SUMO1P63165 101 aaKnown RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 RTL8BQ17RB0 113 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 RPEL1Q2QD12 228 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 PHYHD1Q5SRE7 291 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 BTF3L4Q96K17 158 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 FAM173AQ9BQD7 235 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 NGFP01138 241 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 MNX1P50219 401 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF331Q9NQX6 463 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 CD74P04233 296 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 DEFA4P12838 97 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SULT1A2P50226 295 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 RBM11P57052 281 aaKnown RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 EIF3IQ13347 325 aaKnown RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 CA5BP1Q8WTZ4 195 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SLC25A28Q96A46 364 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ACY3Q96HD9 319 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 RAB40CQ96S21 281 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 S1PR3Q99500 378 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 RSG1Q9BU20 258 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 KCNMB2Q9Y691 235 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 MELTFP08582 738 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 HABP2Q14520 560 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SURF2Q15527 256 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF574Q6ZN55 896 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 FUT9Q9Y231 359 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 KIAA1324LA8MWY0 1029 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 RPL36A-HNRNPH2H7BZ11 118 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 OR3A1P47881 315 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 UBE2G1P62253 170 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ALX4Q9H161 411 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 DUSP15Q9H1R2 295 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SPTA1P02549 2419 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SCTP09683 121 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 OR5G3P0C626 314 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 RAC1P63000 192 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 DEFB109BQ30KR1 87 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SMIM21Q3B7S5 101 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 PTX4Q96A99 478 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 SCARF2Q96GP6 870 aaPredicted RBP5.7□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF391Q9UJN7 358 aa5.7□□□□□ -1.5
SMC1A-202ENST00000375340 MSGN1A6NI15 193 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 A8MXK9 166 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 DNASE2O00115 360 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 CLN5O75503 358 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 HIST1H3AP68431 136 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ROM1Q03395 351 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ZP4Q12836 540 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 LINC00114Q6XXX2 140 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 C1QL2Q7Z5L3 287 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 SPEM1Q8N4L4 309 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 POC1AQ8NBT0 407 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 SLC24A4Q8NFF2 622 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 BSCL2Q96G97 398 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 CLEC1BQ9P126 229 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 NAT8Q9UHE5 227 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 PROCRQ9UNN8 238 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 A0A087X0M5 115 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 A0A1B0GX30 115 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 EPHA8P29322 1005 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ACER2Q5QJU3 275 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 FLVCR1-AS1Q8TAF5 88 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 TRAV34A0A0B4J273 112 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 COX7A2P2O60397 106 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF766Q5HY98 468 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 VAX1Q5SQQ9 334 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 M1APQ8TC57 530 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 P4HTMQ9NXG6 502 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 GPR132Q9UNW8 380 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 LSM6P62312 80 aaKnown RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 GNG3P63215 75 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 EFNB1P98172 346 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 RNASEKQ6P5S7 137 aaKnown RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 OR1L6Q8NGR2 347 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ADAMTS17Q8TE56 1095 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 BLNKQ8WV28 456 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 RTTNQ86VV8 2226 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 C11orf94C9JXX5 98 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 HAND1O96004 215 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 IL24Q13007 206 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ENDOGQ14249 297 aaKnown RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 NSUN5P2Q63ZY6 315 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 SLC35E1Q96K37 410 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 KCNIP2Q9NS61 270 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms