RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 GYPAP02724 150 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 NDUFB7P17568 137 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 RPS20P60866 119 aaKnown RBP8.98□□□□□ -0.97
PTCH1-204ENST00000375290 UBE2L3P68036 154 aaKnown RBP8.98□□□□□ -0.97
PTCH1-204ENST00000375290 OR13H1Q8NG92 308 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 LANCL2Q9NS86 450 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 LOC390937A0A1W2PQ73 354 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 FBLL1A6NHQ2 334 aaKnown RBP8.98□□□□□ -0.97
PTCH1-204ENST00000375290 PNLIPP16233 465 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 RSPO2Q6UXX9 243 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-204ENST00000375290 PROCRQ9UNN8 238 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 SIGLEC5O15389 551 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 VSIG8P0DPA2 414 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 MESTQ5EB52 335 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 TBX15Q96SF7 602 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 MCM3APO60318 1980 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 CTLA4P16410 223 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 THSD4Q6ZMP0 1018 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 WDR13Q9H1Z4 485 aa8.98□□□□□ -0.97
PTCH1-204ENST00000375290 Q1RN00 199 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 GPBAR1Q8TDU6 330 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 MENTQ9BUN1 341 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 ZNF646O15015 1829 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-204ENST00000375290 OR3A4PP47883 348 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 H3BMH7 237 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 RPL36A-HNRNPH2H7BZ11 118 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SIAH2O43255 324 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 LPAR6P43657 344 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 RAB9AP51151 201 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 POLR2GP62487 172 aaKnown RBP eCLIP8.97□□□□□ -0.97
PTCH1-204ENST00000375290 C6orf15Q6UXA7 325 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SCN8AQ9UQD0 1980 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 HPRT1P00492 218 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 D2HGDHQ8N465 521 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 FAM117AQ9C073 453 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 DOK5Q9P104 306 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 LOC105371267A0A1B0GV96 52 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 UBE2CO00762 179 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SKP2Q13309 424 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 C6orf201Q7Z4U5 140 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 ZADH2Q8N4Q0 377 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 WBP1LQ9NX94 342 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SLC25A5P05141 298 aaKnown RBP8.97□□□□□ -0.97
PTCH1-204ENST00000375290 ETFBKMTQ8IXQ9 262 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SF3B6Q9Y3B4 125 aaKnown RBP8.97□□□□□ -0.97
PTCH1-204ENST00000375290 CHST1O43916 411 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 B3GALT4O96024 378 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 IGHMP01871 453 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 CA7P43166 264 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 PMP22Q01453 160 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 FOXF1Q12946 379 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 PRDX4Q13162 271 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 CDKN3Q16667 212 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 OR8B12Q8NGG6 310 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 GALNT14Q96FL9 552 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 ZNF835Q9Y2P0 537 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 TRBV5-7A0A0A0MS05 114 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 ENSAO43768 121 aaKnown RBP8.97□□□□□ -0.97
PTCH1-204ENST00000375290 GABRG2P18507 467 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 RPS16P62249 146 aaKnown RBP8.97□□□□□ -0.97
PTCH1-204ENST00000375290 VSIG4Q9Y279 399 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 LIPT2A6NK58 231 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 ACTL6AO96019 429 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 IL2RAP01589 272 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 CLDN18P56856 261 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 TLNRD1Q9H1K6 362 aa8.97□□□□□ -0.97
PTCH1-204ENST00000375290 A0A1W2PNV4 684 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 PSG6Q00889 435 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 ISOC2Q96AB3 205 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 OR2D2Q9H210 308 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 WASHC3Q9Y3C0 194 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 AQP7O14520 342 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 GRPP07492 148 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 COX6CP09669 75 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 MOB3AQ96BX8 217 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 DXOO77932 396 aaKnown RBP8.96□□□□□ -0.97
PTCH1-204ENST00000375290 ERVFRD-1P60508 538 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 PRO1933Q9H354 126 aa8.96□□□□□ -0.97
PTCH1-204ENST00000375290 PPP1R17O96001 155 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 PRRX1P54821 245 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 TGIF2-C20orf24A0A0A6YYL0 155 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 LINC01549A6NIU2 74 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 CD1BP29016 333 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 TMEM255AQ5JRV8 349 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 MRPL32Q9BYC8 188 aaKnown RBP8.96□□□□□ -0.98
PTCH1-204ENST00000375290 MYOGP15173 224 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 ACP1P24666 158 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 OPRK1P41145 380 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 ACAA2P42765 397 aaKnown RBP8.96□□□□□ -0.98
PTCH1-204ENST00000375290 TMEM267Q0VDI3 215 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-204ENST00000375290 EDDM3AQ14507 147 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 MLF2Q15773 248 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-204ENST00000375290 Q6AWC8 147 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 WDR54Q9H977 334 aa8.96□□□□□ -0.98
PTCH1-204ENST00000375290 SERTM2A0A1B0GWG4 89 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms