RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TMEM262E9PQX1 116 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 C1QCP02747 245 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 LILRA6Q6PI73 481 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 MDP1Q86V88 176 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 OR1L6Q8NGR2 347 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 MS4A10Q96PG2 267 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 AMDHD2Q9Y303 409 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 UBE2L6O14933 153 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 C21orf58P58505 322 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 SLC35B1P78383 322 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 COL10A1Q03692 680 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 MRGPRGQ86SM5 289 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 OR2D3Q8NGH3 330 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 ABHD1Q96SE0 405 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 THYN1Q9P016 225 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 NTMQ9P121 344 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 EXOGQ9Y2C4 368 aaKnown RBP12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 TRDCB7Z8K6 153 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 LINC01387J3KSC0 135 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 KCNMB1Q16558 191 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 SCGB1D4Q6XE38 83 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 ZDHHC22Q8N966 263 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 ALG14Q96F25 216 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 ATP5SQ99766 215 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 H7C2G1 150 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 PLAUP00749 431 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 SPCS3P61009 180 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 NUBPLQ8TB37 319 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 HARBI1Q96MB7 349 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 RAB40CQ96S21 281 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 SLIRPQ9GZT3 109 aaKnown RBP12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 IGF2P01344 180 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 LRRC75AQ8NAA5 344 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 OOEPA6NGQ2 149 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 PPOXP50336 477 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 NRN1LQ496H8 165 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 OR8I2Q8N0Y5 310 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 OR2J1Q9GZK6 312 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 STARD10Q9Y365 291 aa12.91□□□□□ -0.34
NOTCH4-201ENST00000375023 PSG2P11465 335 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 LIFP15018 202 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 MDKP21741 143 aaPredicted RBP12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 PAFAH1B2P68402 229 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 OR4S2Q8NH73 311 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 NEIL1Q96FI4 390 aaPredicted RBP12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 MTFP1Q9UDX5 166 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 SLC25A17O43808 307 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 FCARP24071 287 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 LTBRP36941 435 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 GFRA1P56159 465 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 BHLHA9Q7RTU4 235 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 DOCK5Q9H7D0 1870 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 PPP1CCP36873 323 aaKnown RBP12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 KIR2DS2P43631 304 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 CD81P60033 236 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 MCM3APO60318 1980 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 PGA3P0DJD8 388 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 VDAC1P21796 283 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 RHBDD2Q6NTF9 364 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
NOTCH4-201ENST00000375023 S100A8P05109 93 aa12.9□□□□□ -0.35
NOTCH4-201ENST00000375023 FAM157CP0CG43 387 aa12.9□□□□□ -0.35
NOTCH4-201ENST00000375023 MMDQ15546 238 aa12.9□□□□□ -0.35
NOTCH4-201ENST00000375023 FAM162BQ5T6X4 162 aa12.9□□□□□ -0.35
NOTCH4-201ENST00000375023 OVCH2Q7RTZ1 564 aa12.9□□□□□ -0.35
NOTCH4-201ENST00000375023 KNTC1P50748 2209 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 LIPT2A6NK58 231 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 CEBPEQ15744 281 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 OR2Y1Q8NGV0 311 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 C16orf97H3BN30 126 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 MFNGO00587 321 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 GCSHP23434 173 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 SLC16A13Q7RTY0 426 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 CLRN3Q8NCR9 226 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 C11orf94C9JXX5 98 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 PCMT1P22061 227 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 RAC3P60763 192 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 D2HGDHQ8N465 521 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 OR2H1Q9GZK4 316 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 CLEC18BQ6UXF7 455 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 TMEM52Q8NDY8 209 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 RNF7Q9UBF6 113 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 CENPVL1A0A0U1RR11 272 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 SLC6A1P30531 599 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 PSG6Q00889 435 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 LYZL2Q7Z4W2 148 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 FAM210BQ96KR6 192 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 GPHA2Q96T91 129 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 CCL13Q99616 98 aa12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 AKIRIN1Q9H9L7 192 aaPredicted RBP12.89□□□□□ -0.35
NOTCH4-201ENST00000375023 GPR35Q9HC97 309 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms