RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FOXD3Q9UJU5 478 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-203ENST00000374877 NRASP01111 189 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 PATE4P0C8F1 98 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 HLA-DRB3P79483 266 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 TLE4Q04727 773 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF506Q5JVG8 444 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 RAET1LQ5VY80 246 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 FAM180AQ6UWF9 173 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 DPPA2Q7Z7J5 298 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 OR8G5Q8NG78 346 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 FRZBQ92765 325 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
CCDC40-203ENST00000374877 ZFP92A6NM28 416 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 H3BP45 60 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 TCN2P20062 427 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 UCP3P55916 312 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 SRPXP78539 464 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 C10orf128Q5T292 105 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF774Q6NX45 483 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 IL22RA1Q8N6P7 574 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 CLDND2Q8NHS1 167 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 DEFB126Q9BYW3 111 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 SLC7A10Q9NS82 523 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 IGLV3-32A0A0A0MS00 114 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 PDCD6O75340 191 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 MDKP21741 143 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-203ENST00000374877 Q6ZPA2 131 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 LHFPL2Q6ZUX7 228 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 SLC35E3Q7Z769 313 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 C1orf87Q8N0U7 546 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 CCDC54Q8NEL0 328 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 RNF138Q8WVD3 245 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 SPACA9Q96E40 222 aaPredicted RBP9.55□□□□□ -0.88
CCDC40-203ENST00000374877 RASL10BQ96S79 203 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 C11orf1Q9H5F2 150 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 FAM86C1Q9NVL1 165 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 G3V3Y1 287 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM50AO95807 157 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 CD200P41217 278 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 ABHD5Q8WTS1 349 aa9.55□□□□□ -0.88
CCDC40-203ENST00000374877 RBMXL1Q96E39 390 aaKnown RBP9.55□□□□□ -0.88
CCDC40-203ENST00000374877 ELOA3CA0A087WX78 387 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-203ENST00000374877 LOC102723996A0A087X1L8 192 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 LOC102725191A0A1B0GVB3 256 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF732B4DXR9 585 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 TSTD3H0UI37 97 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 CHST1O43916 411 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 GDF9O60383 454 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 PTBP3O95758 552 aaKnown RBP9.54□□□□□ -0.88
CCDC40-203ENST00000374877 IGHEP01854 428 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 HBE1P02100 147 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 HIST2H3PS2Q5TEC6 136 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 HES3Q5TGS1 186 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 UNQ6494/PRO21346Q6UXR6 183 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 THNSL2Q86YJ6 484 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 SELENOHQ8IZQ5 122 aaKnown RBP9.54□□□□□ -0.88
CCDC40-203ENST00000374877 PIGCQ92535 297 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM54Q969K7 222 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 SNX22Q96L94 193 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 SPRY4Q9C004 299 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 CALHM2Q9HA72 323 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 EML6Q6ZMW3 1958 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 HLA-HP01893 362 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 DDTP30046 118 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 SSTP61278 116 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 MPV17LQ2QL34 196 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 PLCXD3Q63HM9 321 aa9.54□□□□□ -0.88
CCDC40-203ENST00000374877 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-203ENST00000374877 A0A087X0M5 115 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 A0A1B0GX30 115 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 RPS18P62269 152 aaKnown RBP9.53□□□□□ -0.88
CCDC40-203ENST00000374877 HIST1H3AP68431 136 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 DHRS13Q6UX07 377 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 C6orf15Q6UXA7 325 aaPredicted RBP9.53□□□□□ -0.88
CCDC40-203ENST00000374877 Q6ZSR3 168 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 GAPTQ8N292 157 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 OR13D1Q8NGV5 346 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 HSPB6O14558 160 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 PGA5P0DJD9 388 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 FUT3P21217 361 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 H3F3AP84243 136 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF818PQ6ZRF7 136 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
CCDC40-203ENST00000374877 MUC3AQ02505 3323 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 SMCO3A2RU48 225 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 TK1P04183 234 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 RBM11P57052 281 aaKnown RBP9.53□□□□□ -0.88
CCDC40-203ENST00000374877 PKIAP61925 76 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 ODF3L1Q8IXM7 274 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 FAM185AQ8N0U4 392 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 OR2Y1Q8NGV0 311 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 GTF3AQ92664 365 aaKnown RBP9.53□□□□□ -0.88
CCDC40-203ENST00000374877 CRLF2Q9HC73 371 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 LRFN1Q9P244 771 aa9.53□□□□□ -0.88
CCDC40-203ENST00000374877 LOC102723971A0A1B0GUV8 181 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 CLDN34H7C241 214 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms