RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 RTN4IP1Q8WWV3 396 aaPredicted RBP10.58□□□□□ -0.72
PRPF4-202ENST00000374199 RRNAD1Q96FB5 475 aaKnown RBP10.58□□□□□ -0.72
PRPF4-202ENST00000374199 GSX2Q9BZM3 304 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 TMEM222Q9H0R3 208 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 IGKV1D-13A0A0B4J2D9 117 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 SRRM5B3KS81 715 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 MPPED1O15442 326 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 RP2O75695 350 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 IGKV1-13P0DP09 117 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 LHFPL5Q8TAF8 219 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 SNRNP40Q96DI7 357 aaKnown RBP10.58□□□□□ -0.72
PRPF4-202ENST00000374199 SHARPINQ9H0F6 387 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 SH2D1BO14796 132 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 HAND1O96004 215 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 PGAM2P15259 253 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 GLP1RP43220 463 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 UBA52P62987 128 aaKnown RBP10.58□□□□□ -0.72
PRPF4-202ENST00000374199 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 SEC22AQ96IW7 307 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 REG4Q9BYZ8 158 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 RDH8Q9NYR8 311 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 MBD2Q9UBB5 411 aa10.58□□□□□ -0.72
PRPF4-202ENST00000374199 PSPNO60542 156 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 SLC34A2O95436 690 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 CDS2O95674 445 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 THBDP07204 575 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 UCP1P25874 307 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 RGS7BPQ6MZT1 257 aaPredicted RBP10.57□□□□□ -0.72
PRPF4-202ENST00000374199 ZNF818PQ6ZRF7 136 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 ABHD14BQ96IU4 210 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 BARX1Q9HBU1 254 aaPredicted RBP10.57□□□□□ -0.72
PRPF4-202ENST00000374199 PRR13Q9NZ81 148 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 ZNF737O75373 536 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 DEDDO75618 318 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 TK1P04183 234 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 CD55P08174 381 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 OR5AC1P0C628 307 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 RRASP10301 218 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 OR3A1P47881 315 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 SRPXP78539 464 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 BATF2Q8N1L9 274 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 CCDC71LQ8N9Z2 235 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 OR2W1Q9Y3N9 320 aa10.57□□□□□ -0.72
PRPF4-202ENST00000374199 NMBP08949 121 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 GGNBP1Q5YKI7 109 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 EIF4E3Q8N5X7 224 aaKnown RBP10.56□□□□□ -0.72
PRPF4-202ENST00000374199 CNTNAP3BQ96NU0 1288 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 SYT3Q9BQG1 590 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 CNTNAP3Q9BZ76 1288 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 H0Y980 276 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 GPR31O00270 319 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 PRRG2O14669 202 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 SLC25A6P12236 298 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 NMSQ5H8A3 153 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 OR5D13Q8NGL4 314 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 COQ2Q96H96 371 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 C1QTNF6Q9BXI9 259 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 CNOT1A5YKK6 2376 aaKnown RBP10.56□□□□□ -0.72
PRPF4-202ENST00000374199 ZSCAN5BA6NJL1 495 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 CD40P25942 277 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 DUSP1P28562 367 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 C5orf24Q7Z6I8 188 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 LRP11Q86VZ4 500 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 OR11L1Q8NGX0 322 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 MRPL24Q96A35 216 aaKnown RBP10.56□□□□□ -0.72
PRPF4-202ENST00000374199 SLC5A7Q9GZV3 580 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 ARL6Q9H0F7 186 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 OR5AC2Q9NZP5 309 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 COMMD9Q9P000 198 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 TMED3Q9Y3Q3 217 aa10.56□□□□□ -0.72
PRPF4-202ENST00000374199 FAM186AA6NE01 2351 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 C3orf85A0A1B0GTC6 90 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 TIMM8AO60220 97 aaPredicted RBP10.55□□□□□ -0.72
PRPF4-202ENST00000374199 RCC1P18754 421 aaPredicted RBP10.55□□□□□ -0.72
PRPF4-202ENST00000374199 GCH1P30793 250 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 RBMXP38159 391 aaKnown RBP10.55□□□□□ -0.72
PRPF4-202ENST00000374199 ST8SIA2Q92186 375 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 VKORC1Q9BQB6 163 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 ARV1Q9H2C2 271 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 FAM212BQ9NTI7 297 aaPredicted RBP10.55□□□□□ -0.72
PRPF4-202ENST00000374199 TAAR3PQ9P1P4 343 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 SHANK1Q9Y566 2161 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 PET100P0DJ07 73 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 AP2S1P53680 142 aaPredicted RBP10.55□□□□□ -0.72
PRPF4-202ENST00000374199 FAM27E3Q08E93 113 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 SMUG1Q53HV7 270 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 CISD2Q8N5K1 135 aaKnown RBP10.55□□□□□ -0.72
PRPF4-202ENST00000374199 THAP6Q8TBB0 222 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 AKR1E2Q96JD6 320 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 KCNIP3Q9Y2W7 256 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 SPEF1Q9Y4P9 236 aa10.55□□□□□ -0.72
PRPF4-202ENST00000374199 PRRC2CQ9Y520 2896 aaKnown RBP10.55□□□□□ -0.72
PRPF4-202ENST00000374199 HS3ST1O14792 307 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms