RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 F2RL2O00254 374 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 AWAT1Q58HT5 328 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 OR2T10Q8NGZ9 312 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
TRAF1-201ENST00000373887 MEOX2P50222 304 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 DCAF10Q5QP82 559 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 SLC25A30Q5SVS4 291 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 RPLP1P05386 114 aaKnown RBP12.61□□□□□ -0.39
TRAF1-201ENST00000373887 NMUP48645 174 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 MPV17LQ2QL34 196 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 OR10A7Q8NGE5 316 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 OR10G8Q8NGN5 311 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 R3HDM4Q96D70 268 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 AURKAIP1Q9NWT8 199 aaPredicted RBP12.61□□□□□ -0.39
TRAF1-201ENST00000373887 FAM219AQ8IW50 185 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF383Q8NA42 475 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 ATG101Q9BSB4 218 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 FLRT3Q9NZU0 649 aa12.61□□□□□ -0.39
TRAF1-201ENST00000373887 INHBBP09529 407 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 WNT5AP41221 380 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 IL13RA2Q14627 380 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 TGIF1Q15583 401 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 C1QL3Q5VWW1 255 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 DYNLRB2Q8TF09 96 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 C4orf45Q96LM5 186 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 OR2J1Q9GZK6 312 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 PAM16Q9Y3D7 125 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 CORTO00230 105 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 HLA-GP17693 338 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 TMEM33P57088 247 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 RIGQ13278 110 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 ZIC1Q15915 447 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 BSXQ3C1V8 233 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 ANKRD55Q3KP44 614 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 BPIFA4PQ86YQ2 179 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 LRRC75AQ8NAA5 344 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 RAB37Q96AX2 223 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 QSER1Q2KHR3 1735 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 A6NDN8 102 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 C21orf140B9A014 251 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 ADAP1O75689 374 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 CD226Q15762 336 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 HIKESHIQ53FT3 197 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 SH2D5Q6ZV89 423 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 EAF1Q96JC9 268 aaPredicted RBP12.6□□□□□ -0.39
TRAF1-201ENST00000373887 TMEM204Q9BSN7 226 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 UQCRFS1P47985 274 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 DLK1P80370 383 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 RGP1Q92546 391 aaPredicted RBP12.6□□□□□ -0.39
TRAF1-201ENST00000373887 FGF11Q92914 225 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF256Q9Y2P7 627 aaPredicted RBP12.6□□□□□ -0.39
TRAF1-201ENST00000373887 IER3P46695 156 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 GABRA6Q16445 453 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 CTF1Q16619 201 aa12.6□□□□□ -0.39
TRAF1-201ENST00000373887 DLL1O00548 723 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 TCF21O43680 179 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF324O75467 553 aaPredicted RBP12.59□□□□□ -0.39
TRAF1-201ENST00000373887 SRSF10O75494 262 aaKnown RBP12.59□□□□□ -0.39
TRAF1-201ENST00000373887 CD82P27701 267 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 CEACAM3P40198 252 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 ATP1A1-AS1Q5TC04 95 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 C12orf73Q69YU5 71 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 VN1R17PQ8TDU5 208 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 CXXC4Q9H2H0 198 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 PLPP3O14495 311 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 STARD4Q96DR4 205 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 IGSF23A1L1A6 192 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 IFITM10A6NMD0 228 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 APCSP02743 223 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 FAM157CP0CG43 387 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 SELENOPP49908 381 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 COL19A1Q14993 1142 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 SSX8Q7RTT4 187 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 OR5AU1Q8NGC0 362 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF502Q8TBZ5 544 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 TMEM167BQ9NRX6 74 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 MVDP53602 400 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
TRAF1-201ENST00000373887 MIEN1Q9BRT3 115 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 GPR27Q9NS67 375 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 PRSS54Q6PEW0 395 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 FAHD2AQ96GK7 314 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 SIGLEC7Q9Y286 467 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
TRAF1-201ENST00000373887 PEBP1P30086 187 aaKnown RBP12.58□□□□□ -0.39
TRAF1-201ENST00000373887 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.39
TRAF1-201ENST00000373887 C11orf91Q3C1V1 193 aa12.58□□□□□ -0.39
TRAF1-201ENST00000373887 ANAPC16Q96DE5 110 aa12.58□□□□□ -0.39
TRAF1-201ENST00000373887 UCN2Q96RP3 112 aa12.58□□□□□ -0.39
TRAF1-201ENST00000373887 SIRT5Q9NXA8 310 aa12.58□□□□□ -0.39
TRAF1-201ENST00000373887 PRSS50Q9UI38 385 aa12.58□□□□□ -0.39
TRAF1-201ENST00000373887 HSPB8Q9UJY1 196 aa12.58□□□□□ -0.39
TRAF1-201ENST00000373887 AMDHD2Q9Y303 409 aa12.58□□□□□ -0.39
TRAF1-201ENST00000373887 FOXO1Q12778 655 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 MEGF10Q96KG7 1140 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 TCRBV16S1A1N1A0A5B0 115 aa12.58□□□□□ -0.4
TRAF1-201ENST00000373887 ZFPL1O95159 310 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms