RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ANAPC10Q9UM13 185 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
TMEM53-204ENST00000372243 BAHCC1Q9P281 2608 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 ODAMA1E959 279 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 A8MXK9 166 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-204ENST00000372243 FCGR3AP08637 254 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 USF1P22415 310 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-204ENST00000372243 GLIPR1P48060 266 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 EDDM3BP56851 147 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 SEC61A1P61619 476 aaKnown RBP13.12□□□□□ -0.31
TMEM53-204ENST00000372243 DGCR2P98153 550 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 Q6ZS49 121 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 FGFRL1Q8N441 504 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 SDHCQ99643 169 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-204ENST00000372243 DCTN5Q9BTE1 182 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 CHMP1AQ9HD42 196 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-204ENST00000372243 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
TMEM53-204ENST00000372243 RBMX2Q9Y388 322 aaKnown RBP13.12□□□□□ -0.31
TMEM53-204ENST00000372243 MEIKINA0A087WXM9 373 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 A0A096LNT2 108 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 RBBP9O75884 186 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 ACTBP60709 375 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 ACTG1P63261 375 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 CD276Q5ZPR3 534 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 Q6ZPA2 131 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 ZNF554Q86TJ5 538 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 TPRX1Q8N7U7 411 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 OR4K15Q8NH41 348 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 C8orf46Q8TAG6 207 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 CORO2AQ92828 525 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 DMRTB1Q96MA1 342 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
TMEM53-204ENST00000372243 Q9N2K0 584 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 TRAPPC2LQ9UL33 140 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 VPS13CQ709C8 3753 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 hADV38S2A0JD32 116 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 NAT1P18440 290 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 GZMHP20718 246 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 RPL31P62899 125 aaKnown RBP13.11□□□□□ -0.31
TMEM53-204ENST00000372243 LOXL1Q08397 574 aaPredicted RBP13.11□□□□□ -0.31
TMEM53-204ENST00000372243 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 HOGA1Q86XE5 327 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 ZNF565Q8N9K5 539 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 H1FXQ92522 213 aaKnown RBP13.11□□□□□ -0.31
TMEM53-204ENST00000372243 Q96MF0 132 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 IFT46Q9NQC8 304 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 KLK11Q9UBX7 282 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 ZNF107Q9UII5 783 aaPredicted RBP13.11□□□□□ -0.31
TMEM53-204ENST00000372243 POLR3KQ9Y2Y1 108 aaPredicted RBP13.11□□□□□ -0.31
TMEM53-204ENST00000372243 LINC00312Q9Y6C7 94 aa13.11□□□□□ -0.31
TMEM53-204ENST00000372243 DOCK11Q5JSL3 2073 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 DSCAML1Q8TD84 2053 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 ORC5O43913 435 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 RCVRNP35243 200 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 BAK1Q16611 211 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 C6orf183Q5T699 404 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 C1orf159Q96HA4 380 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 OPN4Q9UHM6 478 aa13.1□□□□□ -0.31
TMEM53-204ENST00000372243 ZNF230Q9UIE0 474 aaPredicted RBP13.1□□□□□ -0.31
TMEM53-204ENST00000372243 UBE2J1Q9Y385 318 aaPredicted RBP13.1□□□□□ -0.31
TMEM53-204ENST00000372243 PRRC2AP48634 2157 aaKnown RBP13.09□□□□□ -0.31
TMEM53-204ENST00000372243 TRGV10A0A0A0MS01 117 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 KIR2DS1A0A191URI9 304 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 MEIS3P1A6NDR6 274 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 KIAA1324LA8MWY0 1029 aaPredicted RBP13.09□□□□□ -0.31
TMEM53-204ENST00000372243 PHF1O43189 567 aaPredicted RBP13.09□□□□□ -0.31
TMEM53-204ENST00000372243 FOXH1O75593 365 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 RCC1P18754 421 aaPredicted RBP13.09□□□□□ -0.31
TMEM53-204ENST00000372243 KIR2DS4P43632 304 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 KIR2DS1Q14954 304 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 RNASE12Q5GAN4 147 aaKnown RBP13.09□□□□□ -0.31
TMEM53-204ENST00000372243 GVQW1Q8N7I0 195 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 LY6G5BQ8NDX9 201 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 BEST4Q8NFU0 473 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 OR13A1Q8NGR1 328 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 ST6GALNAC5Q9BVH7 336 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 REG4Q9BYZ8 158 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 ZNF286AQ9HBT8 521 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 TAS2R3Q9NYW6 316 aa13.09□□□□□ -0.31
TMEM53-204ENST00000372243 RPUSD1Q9UJJ7 312 aaKnown RBP13.09□□□□□ -0.31
TMEM53-204ENST00000372243 LOC105371242A0A075B767 164 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 J3QRK9 145 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 CGB3P0DN86 165 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 CGB7P0DN87 165 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 IL7P13232 177 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 IL2RGP31785 369 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 GDNFP39905 211 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 HMGN3Q15651 99 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 TMEM200BQ69YZ2 307 aa13.08□□□□□ -0.32
TMEM53-204ENST00000372243 TCF23Q7RTU1 214 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms