RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 FAM90A1Q86YD7 464 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 C9orf62Q8N4C0 152 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 OR4A4PQ8NGN8 299 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 OR5M8Q8NGP6 311 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 CABLES2Q9BTV7 478 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 SEBOXQ9HB31 216 aaPredicted RBP14.73□□□□□ -0.05
SSBP3-203ENST00000371319 OPN4Q9UHM6 478 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 ERRFI1Q9UJM3 462 aaPredicted RBP14.73□□□□□ -0.05
SSBP3-203ENST00000371319 MGAT4AQ9UM21 535 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 WIPI2Q9Y4P8 454 aa14.73□□□□□ -0.05
SSBP3-203ENST00000371319 TRAV39A0A0B4J263 110 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 A0A0B4J2A0 478 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 DBX1A6NMT0 343 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 E7EQL1 145 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 BET1O15155 118 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 TUSC2O75896 110 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 PPYP01298 95 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 CTXN2P0C2S0 81 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 PSG2P11465 335 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 OR3A1P47881 315 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 SEC61A1P61619 476 aaKnown RBP14.72□□□□□ -0.05
SSBP3-203ENST00000371319 SORDQ00796 357 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 COL10A1Q03692 680 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 SRSF4Q08170 494 aaKnown RBP14.72□□□□□ -0.05
SSBP3-203ENST00000371319 NEUROG1Q92886 237 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 TOMM40LQ969M1 308 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 GCM1Q9NP62 436 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 NDRG3Q9UGV2 375 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 SHPKQ9UHJ6 478 aa14.72□□□□□ -0.05
SSBP3-203ENST00000371319 IGKV1D-17A0A075B6S4 117 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.71□□□□□ -0.05
SSBP3-203ENST00000371319 CRYM-AS1A6NIL9 109 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 CCSO14618 274 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 CD55P08174 381 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 TNFSF4P23510 183 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 HERV-K104P61576 105 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 ANKRD55Q3KP44 614 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 SLC35E4Q6ICL7 350 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 C11orf88Q6PI97 169 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 BOLLQ8N9W6 283 aaKnown RBP14.71□□□□□ -0.05
SSBP3-203ENST00000371319 OR5T2Q8NGG2 359 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 CA5BP1Q8WTZ4 195 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 ASB13Q8WXK3 278 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 RSRP1Q9BUV0 290 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 CLEC4MQ9H2X3 399 aaPredicted RBP14.71□□□□□ -0.05
SSBP3-203ENST00000371319 MBNL3Q9NUK0 354 aaKnown RBP14.71□□□□□ -0.05
SSBP3-203ENST00000371319 ATRXP46100 2492 aa14.71□□□□□ -0.05
SSBP3-203ENST00000371319 IGHV3OR15-7A0A075B7D8 119 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 TRBV6-7A0A0A0MS04 114 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 TMEM30CPA0ZSE6 113 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 SIAH2O43255 324 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 TK1P04183 234 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 CD3EP07766 207 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 PRDX2P32119 198 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 TFF3Q07654 80 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 HMGN3Q15651 99 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 LPCAT3Q6P1A2 487 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 KCTD9Q7L273 389 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 SLC38A6Q8IZM9 456 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 GRPEL2Q8TAA5 225 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 Q8TCH9 128 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 PIK3IP1Q96FE7 263 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 LRRC46Q96FV0 321 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 COQ2Q96H96 371 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 DIRC2Q96SL1 478 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 KCNJ16Q9NPI9 418 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 PRR13Q9NZ81 148 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 TRAPPC2LQ9UL33 140 aa14.7□□□□□ -0.06
SSBP3-203ENST00000371319 C17orf100A8MU93 164 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 DIRAS3O95661 229 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 CD80P33681 288 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 SERPINF1P36955 418 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 KCNJ3P48549 501 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 PIGPP57054 158 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 H1FOOQ8IZA3 346 aaPredicted RBP14.69□□□□□ -0.06
SSBP3-203ENST00000371319 FAM222BQ8WU58 562 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 ERGIC1Q969X5 290 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 SHARPINQ9H0F6 387 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 RNF7Q9UBF6 113 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 PCDHB10Q9UN67 800 aa14.69□□□□□ -0.06
SSBP3-203ENST00000371319 VSTM5A8MXK1 200 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 NPIPB11E5RHQ5 1161 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 ZNF737O75373 536 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 PLAUP00749 431 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 COQ8AQ8NI60 647 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 KIRREL1Q96J84 757 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 DNAJB11Q9UBS4 358 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 HCFC1P51610 2035 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 IGKV1D-13A0A0B4J2D9 117 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 RGS11O94810 467 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 IFNA2P01563 188 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 IGKV1-13P0DP09 117 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 LOXP28300 417 aaPredicted RBP14.68□□□□□ -0.06
SSBP3-203ENST00000371319 TLE1Q04724 770 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 AESQ08117 197 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 ABCA11PQ4W5N1 156 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 FAM201AQ5SY85 155 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 SGPP2Q8IWX5 399 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 OR11L1Q8NGX0 322 aa14.68□□□□□ -0.06
SSBP3-203ENST00000371319 TMEM246Q9BRR3 403 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms