RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 C5orf56Q8N8D9 126 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 Q8NFD4 153 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 PXT1Q8NFP0 134 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 OR4X2Q8NGF9 303 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 TSEN15Q8WW01 171 aaKnown RBP10.4□□□□□ -0.74
RPF1-201ENST00000370654 RPEQ96AT9 228 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 MOB4Q9Y3A3 225 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 ORC6Q9Y5N6 252 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 HSPE1-MOB4S4R3N1 261 aa10.4□□□□□ -0.74
RPF1-201ENST00000370654 IGHV3-72A0A0B4J1Y9 119 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 PSMB11A5LHX3 300 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 TMEM212A6NML5 194 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 OOSP1A8MZH6 123 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 HTR3BO95264 441 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 MNDAP41218 407 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 SLC35A2P78381 396 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 THNSL2Q86YJ6 484 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 SUMF2Q8NBJ7 301 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 OR13C5Q8NGS8 318 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 CREB3L1Q96BA8 519 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 DUX3Q96PT4 197 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 JAM3Q9BX67 310 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 FAM192AQ9GZU8 254 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 A0A1W2PP11 408 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 MAGEA13PA6NCF6 341 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 H3BUI4 141 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 WBP4O75554 376 aaKnown RBP10.39□□□□□ -0.75
RPF1-201ENST00000370654 LALBAP00709 142 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 IGKV1D-33P01593 117 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 IGKV1-33P01594 117 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 CCDC159P0C7I6 412 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 FAM106CPP0CH98 169 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 TMEM11P17152 192 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 RAB3AP20336 220 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 REG1BP48304 166 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 ETV1P50549 477 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 GBX2P52951 348 aaPredicted RBP10.39□□□□□ -0.75
RPF1-201ENST00000370654 RPL23AP62750 156 aaKnown RBP10.39□□□□□ -0.75
RPF1-201ENST00000370654 IL13RA2Q14627 380 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 OR2G6Q5TZ20 316 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 CCDC144NLQ6NUI1 221 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 C8orf86Q6ZUL3 223 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 ZNF565Q8N9K5 539 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 RCC1LQ96I51 464 aaKnown RBP10.39□□□□□ -0.75
RPF1-201ENST00000370654 GPER1Q99527 375 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 DPCDQ9BVM2 203 aaPredicted RBP10.39□□□□□ -0.75
RPF1-201ENST00000370654 NCOR1P1Q9H4R4 102 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 MRPS18AQ9NVS2 196 aaKnown RBP10.39□□□□□ -0.75
RPF1-201ENST00000370654 FAM118AQ9NWS6 357 aa10.39□□□□□ -0.75
RPF1-201ENST00000370654 RYR3Q15413 4870 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 LOC100130705A0A1B0GUX0 176 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 C15orf65H3BRN8 121 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 FADS2O95864 444 aaKnown RBP10.38□□□□□ -0.75
RPF1-201ENST00000370654 RPSAP08865 295 aaKnown RBP10.38□□□□□ -0.75
RPF1-201ENST00000370654 C21orf33P30042 268 aaPredicted RBP10.38□□□□□ -0.75
RPF1-201ENST00000370654 THBS3P49746 956 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 ARHGDIBP52566 201 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 EGFEM1PQ0D2K5 195 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 RAB40BQ12829 278 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 MADCAM1Q13477 382 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 HES1Q14469 280 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 RSU1Q15404 277 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 DEFB121Q5J5C9 76 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 LCNL1Q6ZST4 164 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 OR2W3Q7Z3T1 314 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 CCDC107Q8WV48 283 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 BARHL1Q9BZE3 327 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 ING4Q9UNL4 249 aa10.38□□□□□ -0.75
RPF1-201ENST00000370654 COL7A1Q02388 2944 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 IGHV3-43A0A0B4J1X8 118 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 SNTNA6NMZ2 147 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 ZNF736B4DX44 427 aaPredicted RBP10.37□□□□□ -0.75
RPF1-201ENST00000370654 M0QZK8 103 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 GEMIN2O14893 280 aaKnown RBP10.37□□□□□ -0.75
RPF1-201ENST00000370654 SLC31A2O15432 143 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 IGHV3-43DP0DP04 118 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 PAX5Q02548 391 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 C5orf24Q7Z6I8 188 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 FGF20Q9NP95 211 aaPredicted RBP10.37□□□□□ -0.75
RPF1-201ENST00000370654 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.37□□□□□ -0.75
RPF1-201ENST00000370654 ST3GAL6Q9Y274 331 aa10.37□□□□□ -0.75
RPF1-201ENST00000370654 AMMECR1Q9Y4X0 333 aaPredicted RBP10.37□□□□□ -0.75
RPF1-201ENST00000370654 IGHV1-3A0A0C4DH29 117 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 SERPINE3A8MV23 424 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 HSD17B6O14756 317 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 CLIC3O95833 236 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 IGHG2P01859 326 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 SERPINA2P20848 420 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 RBM11P57052 281 aaKnown RBP10.36□□□□□ -0.75
RPF1-201ENST00000370654 DOC2BQ14184 412 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 EBI3Q14213 229 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 VAX1Q5SQQ9 334 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 ZFP1Q6P2D0 407 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 MOB3BQ86TA1 216 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 Q8N6K4 173 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 OR52N1Q8NH53 320 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 HAVCR2Q8TDQ0 301 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 TMEM106AQ96A25 262 aa10.36□□□□□ -0.75
RPF1-201ENST00000370654 MRPL48Q96GC5 212 aaKnown RBP10.36□□□□□ -0.75
RPF1-201ENST00000370654 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms