RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PSG4Q00888 419 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 FA2HQ7L5A8 372 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 ATG2BQ96BY7 2078 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 TRAV39A0A0B4J263 110 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 HSBP1O75506 76 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 GABRA6Q16445 453 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 RNF2Q99496 336 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 NQO2P16083 231 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 HOGA1Q86XE5 327 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 PTX4Q96A99 478 aa17.16■□□□□ 0.34
LMO4-202ENST00000370544 NOL4LQ96MY1 436 aaPredicted RBP17.16■□□□□ 0.34
LMO4-202ENST00000370544 NXF2Q9GZY0 626 aaKnown RBP17.16■□□□□ 0.34
LMO4-202ENST00000370544 GYPAP02724 150 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 RBM11P57052 281 aaKnown RBP17.15■□□□□ 0.34
LMO4-202ENST00000370544 ZNF260Q3ZCT1 412 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 TMEM65Q6PI78 240 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 OR52L2PQ8NGH6 319 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 PGA4P0DJD7 388 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 CD300CQ08708 224 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 OR11H7Q8NGC8 314 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 A0A0U1RQV5 110 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 F2RL2O00254 374 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 HPXP02790 462 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 AESQ08117 197 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 DHRS7BQ6IAN0 325 aaPredicted RBP17.15■□□□□ 0.34
LMO4-202ENST00000370544 TGIF2LYQ8IUE0 185 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 TGIF2LXQ8IUE1 241 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 COA4Q9NYJ1 87 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 KLK13Q9UKR3 277 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 YTHDF2Q9Y5A9 579 aaKnown RBP17.15■□□□□ 0.34
LMO4-202ENST00000370544 CCL21O00585 134 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 GCM2O75603 506 aaPredicted RBP17.15■□□□□ 0.34
LMO4-202ENST00000370544 ZNF66Q6ZN08 573 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 NHLRC2Q8NBF2 726 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 LURAP1Q96LR2 239 aa17.15■□□□□ 0.34
LMO4-202ENST00000370544 GPX7Q96SL4 187 aaPredicted RBP17.15■□□□□ 0.34
LMO4-202ENST00000370544 A0A1W2PPC1 479 aa17.14■□□□□ 0.34
LMO4-202ENST00000370544 RPS4Y1P22090 263 aaKnown RBP17.14■□□□□ 0.34
LMO4-202ENST00000370544 LGALS7P47929 136 aa17.14■□□□□ 0.34
LMO4-202ENST00000370544 HDHD3Q9BSH5 251 aaPredicted RBP17.14■□□□□ 0.34
LMO4-202ENST00000370544 UCNP55089 124 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 UBE2L3P68036 154 aaKnown RBP17.14■□□□□ 0.33
LMO4-202ENST00000370544 RNF212Q495C1 297 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 ZBTB34Q8NCN2 500 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 MRGPRFQ96AM1 343 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 NAT8BQ9UHF3 227 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 OPN4Q9UHM6 478 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 IFI6P09912 130 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 LPAR3Q9UBY5 353 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 NUP214P35658 2090 aaPredicted RBP17.14■□□□□ 0.33
LMO4-202ENST00000370544 RBFOX3A6NFN3 312 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 PMCHP20382 165 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 ANGPTL6Q8NI99 470 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 ADIPOR1Q96A54 375 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 NPTNQ9Y639 398 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 SPINK4O60575 86 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 G6PCP35575 357 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 ZNF488Q96MN9 340 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 HEXA-AS1Q9H8Q6 139 aa17.14■□□□□ 0.33
LMO4-202ENST00000370544 LOC102723971A0A1B0GUV8 181 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 NKX2-6A6NCS4 301 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 RPEL1Q2QD12 228 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 LYZL2Q7Z4W2 148 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 MANBALQ9NQG1 85 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 TNFRSF19Q9NS68 423 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 SLC7A10Q9NS82 523 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 PIPOXQ9P0Z9 390 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 GATCO43716 136 aaKnown RBP17.13■□□□□ 0.33
LMO4-202ENST00000370544 FSTP19883 344 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 COL10A1Q03692 680 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 FGF11Q92914 225 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 TECRQ9NZ01 308 aaKnown RBP17.13■□□□□ 0.33
LMO4-202ENST00000370544 PRNDQ9UKY0 176 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 FAM214BQ7L5A3 538 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 OR10A7Q8NGE5 316 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 TMEM37Q8WXS4 190 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 DNASE2BQ8WZ79 361 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 OPN3Q9H1Y3 402 aaPredicted RBP17.13■□□□□ 0.33
LMO4-202ENST00000370544 ASCC3Q8N3C0 2202 aaKnown RBP17.13■□□□□ 0.33
LMO4-202ENST00000370544 NKX2-8O15522 239 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 FLYWCH2Q96CP2 140 aaKnown RBP17.13■□□□□ 0.33
LMO4-202ENST00000370544 RASL11BQ9BPW5 248 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 WFDC6Q9BQY6 131 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 TMEM167BQ9NRX6 74 aa17.13■□□□□ 0.33
LMO4-202ENST00000370544 MS4A18H0YCH9 400 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 MS4A18Q3C1V0 323 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 VSIG4Q9Y279 399 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 SMIM10L1P0DMW3 83 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 ZNF788Q6ZQV5 615 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 PDPNQ86YL7 162 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 SMIM10Q96HG1 83 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 DNASE2O00115 360 aaPredicted RBP17.12■□□□□ 0.33
LMO4-202ENST00000370544 CEACAM21Q3KPI0 293 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 C1orf174Q8IYL3 243 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 SCARF2Q96GP6 870 aaPredicted RBP17.12■□□□□ 0.33
LMO4-202ENST00000370544 KCNK17Q96T54 332 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 WIPI2Q9Y4P8 454 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 PSG2P11465 335 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 SSX8Q7RTT4 187 aa17.12■□□□□ 0.33
LMO4-202ENST00000370544 CDS2O95674 445 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms