RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 BRS3P32247 399 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 EIF3IQ13347 325 aaKnown RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 OVCH2Q7RTZ1 564 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 OR10C1Q96KK4 312 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 SLIRPQ9GZT3 109 aaKnown RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 PPP1CCP36873 323 aaKnown RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 COL13A1Q5TAT6 717 aaPredicted RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 OR8I2Q8N0Y5 310 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 EIF4E3Q8N5X7 224 aaKnown RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 OR2H1Q9GZK4 316 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 MRPL24Q96A35 216 aaKnown RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 MS4A7Q9GZW8 240 aaPredicted RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 RNF7Q9UBF6 113 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 PAGE4O60829 102 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 SMAD7O15105 426 aaKnown RBP15.93■□□□□ 0.14
SNX27-202ENST00000368841 INHBBP09529 407 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 RNF212Q495C1 297 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 ZNF665Q9H7R5 613 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 SLC25A10Q9UBX3 287 aaPredicted RBP15.93■□□□□ 0.14
SNX27-202ENST00000368841 SPINT1O43278 529 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 DLK1P80370 383 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 SRSF9Q13242 221 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNX27-202ENST00000368841 MMDQ15546 238 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 ZNF441Q8N8Z8 693 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 SNX22Q96L94 193 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 MAP1LC3CQ9BXW4 147 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 FUT9Q9Y231 359 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 NKX2-6A6NCS4 301 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 PLAUP00749 431 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 IER3P46695 156 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 LY6EQ16553 131 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 ELOVL1Q9BW60 279 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 FAM216AQ8WUB2 273 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 ZNF831Q5JPB2 1677 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 LYZL2Q7Z4W2 148 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 OR51B2Q9Y5P1 312 aa15.93■□□□□ 0.14
SNX27-202ENST00000368841 LIPT2A6NK58 231 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 LDLRAD3Q86YD5 345 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 ABHD1Q96SE0 405 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 HLA-DRB5Q30154 266 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 OR8G5Q8NG78 346 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 PTP4A1Q93096 173 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 TBX15Q96SF7 602 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 GPR35Q9HC97 309 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 UBE2L6O14933 153 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 ADAM11O75078 769 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 KRTCAP3Q53RY4 240 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 CACFD1Q9UGQ2 172 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 DTX4Q9Y2E6 619 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 FBLL1A6NHQ2 334 aaKnown RBP15.92■□□□□ 0.14
SNX27-202ENST00000368841 EIF3GO75821 320 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNX27-202ENST00000368841 HLA-GP17693 338 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 SCMH1Q96GD3 660 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 ANKRD20A5PA0PJZ0 165 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 NAT2P11245 290 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 IL13RA2Q14627 380 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 CCL13Q99616 98 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 LPAR3Q9UBY5 353 aa15.92■□□□□ 0.14
SNX27-202ENST00000368841 CLDN34H7C241 214 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 M0R3E3 92 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 KIAA0040Q15053 153 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 SSX8Q7RTT4 187 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 OR6X1Q8NH79 312 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 AKAP11Q9UKA4 1901 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 ZNF770Q6IQ21 691 aaPredicted RBP15.91■□□□□ 0.14
SNX27-202ENST00000368841 Q8WTZ3 238 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 BTF3P20290 206 aaKnown RBP15.91■□□□□ 0.14
SNX27-202ENST00000368841 C21orf62-AS1Q17RA5 79 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 HIST3H3Q16695 136 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 AWAT1Q58HT5 328 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 PTX4Q96A99 478 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 GUCD1Q96NT3 240 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 MBD1Q9UIS9 605 aaPredicted RBP15.91■□□□□ 0.14
SNX27-202ENST00000368841 ROM1Q03395 351 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 PRSS42Q7Z5A4 293 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 SIGLEC5O15389 551 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 RCC1P18754 421 aaPredicted RBP15.91■□□□□ 0.14
SNX27-202ENST00000368841 HLA-DRB3P79483 266 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 SIGLEC14Q08ET2 396 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 TMEM255AQ5JRV8 349 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 ZPLD1Q8TCW7 415 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 STARD4Q96DR4 205 aa15.91■□□□□ 0.14
SNX27-202ENST00000368841 UQCRFS1P47985 274 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 NMUP48645 174 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 TAS2R60P59551 318 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 SPANXN1Q5VSR9 72 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 CBLN2Q8IUK8 224 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 TTTY12Q9BZ98 90 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 SLC52A3Q9NQ40 469 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 RNF24Q9Y225 148 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 FFAR1O14842 300 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 C1QCP02747 245 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 DPPA3Q6W0C5 159 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 ALS2Q96Q42 1657 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 ZNF426Q9BUY5 554 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 PRR35P0CG20 571 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 PRSS54Q6PEW0 395 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 NAT8Q9UHE5 227 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 CBY1Q9Y3M2 126 aa15.9■□□□□ 0.14
SNX27-202ENST00000368841 SYNGR2O43760 224 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms