RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PHF21AQ96BD5 680 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
TPM3-211ENST00000368531 DCUN1D5Q9BTE7 237 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 SIRPDQ9H106 197 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 SIRT7Q9NRC8 400 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 LPAR3Q9UBY5 353 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 OPN4Q9UHM6 478 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 AK3Q9UIJ7 227 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 TRAPPC2LQ9UL33 140 aa11.43□□□□□ -0.58
TPM3-211ENST00000368531 SMIM31A0A1B0GVY4 71 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 A0A1W2PPH5 198 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 FOXI3A8MTJ6 420 aaPredicted RBP11.42□□□□□ -0.58
TPM3-211ENST00000368531 HPGDSO60760 199 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 TMEM127O75204 238 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 MT-ND4P03905 459 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 GLAP06280 429 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 ZNF728P0DKX0 622 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 MADCAM1Q13477 382 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 MZT2AQ6P582 158 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 ZNF497Q6ZNH5 498 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 VMO1Q7Z5L0 202 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 IZUMO1Q8IYV9 350 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 Q8N7P7 452 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 OR13A1Q8NGR1 328 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 UBALD1Q8TB05 177 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 SETD6Q8TBK2 473 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 ACOT12Q8WYK0 555 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 AP3S1Q92572 193 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 ZNF714Q96N38 554 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 TBX15Q96SF7 602 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 HDHD3Q9BSH5 251 aaPredicted RBP11.42□□□□□ -0.58
TPM3-211ENST00000368531 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 KRTAP3-2Q9BYR7 98 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 CHMP1AQ9HD42 196 aaPredicted RBP11.42□□□□□ -0.58
TPM3-211ENST00000368531 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 LINC00312Q9Y6C7 94 aa11.42□□□□□ -0.58
TPM3-211ENST00000368531 F8P00451 2351 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 TRAV18A0A075B6X5 111 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 EIF4EP06730 217 aaKnown RBP11.41□□□□□ -0.58
TPM3-211ENST00000368531 OMGP23515 440 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 SRP14P37108 136 aaKnown RBP11.41□□□□□ -0.58
TPM3-211ENST00000368531 DLX6P56179 175 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 KLRD1Q13241 179 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 ARFRP1Q13795 201 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 LTC4SQ16873 150 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 CDNFQ49AH0 187 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 UBE2NLQ5JXB2 153 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 FOXB2Q5VYV0 432 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 ZNF782Q6ZMW2 699 aaPredicted RBP11.41□□□□□ -0.58
TPM3-211ENST00000368531 ZNF565Q8N9K5 539 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 LHX4Q969G2 390 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 S100A16Q96FQ6 103 aaKnown RBP11.41□□□□□ -0.58
TPM3-211ENST00000368531 CMSS1Q9BQ75 279 aaKnown RBP11.41□□□□□ -0.58
TPM3-211ENST00000368531 DIABLOQ9NR28 239 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 NDUFA13Q9P0J0 144 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 ELF5Q9UKW6 265 aaPredicted RBP11.41□□□□□ -0.58
TPM3-211ENST00000368531 HSF4Q9ULV5 492 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 KCNK7Q9Y2U2 307 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 UBE2J1Q9Y385 318 aaPredicted RBP11.41□□□□□ -0.58
TPM3-211ENST00000368531 KPTNQ9Y664 436 aa11.41□□□□□ -0.58
TPM3-211ENST00000368531 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 TRAV40A0A0B4J280 105 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 hCG_1809904A0A1W2PP81 198 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 A0A1W2PPE2 198 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 A0A1W2PR64 198 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 A0A1W2PRV1 198 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 FAM172BPA6NC97 362 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 FAM25AB3EWG3 89 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 FAM25CB3EWG5 89 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 FAM25GB3EWG6 89 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 M0R1W7 72 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 RGS5O15539 181 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 MMP23AO75900 390 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 CD3GP09693 182 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 MMP9P14780 707 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
TPM3-211ENST00000368531 RCC1P18754 421 aaPredicted RBP11.4□□□□□ -0.58
TPM3-211ENST00000368531 HNF1AP20823 631 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 CDK2P24941 298 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 C17orf58Q2M2W7 97 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 PRAMEF5Q5TYX0 476 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 C5orf24Q7Z6I8 188 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 C11orf42Q8N5U0 333 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 RFESDQ8TAC1 157 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 MRPL30Q8TCC3 161 aaKnown RBP11.4□□□□□ -0.58
TPM3-211ENST00000368531 CORO2AQ92828 525 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 DGCR14Q96DF8 476 aaKnown RBP11.4□□□□□ -0.58
TPM3-211ENST00000368531 BEX2Q9BXY8 128 aa11.4□□□□□ -0.58
TPM3-211ENST00000368531 CCDC59Q9P031 241 aaKnown RBP11.4□□□□□ -0.58
TPM3-211ENST00000368531 ZNF469Q96JG9 3925 aaPredicted RBP11.4□□□□□ -0.58
TPM3-211ENST00000368531 ZNF729A6NN14 1252 aaPredicted RBP11.39□□□□□ -0.59
TPM3-211ENST00000368531 C17orf98A8MV24 154 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 ZNF701M0R085 212 aaPredicted RBP11.39□□□□□ -0.59
TPM3-211ENST00000368531 MFNGO00587 321 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 CTDSP2O14595 271 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 SCGNO76038 276 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms