RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF714Q96N38 554 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 RNF122Q9H9V4 155 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 MPC2O95563 127 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 PEX11BO96011 259 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 POLR2GP62487 172 aaKnown RBP eCLIP13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 SH2D5Q6ZV89 423 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 SLC25A33Q9BSK2 321 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 FBXL17Q9UF56 701 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 OR51B2Q9Y5P1 312 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 FAM181BA6NEQ2 426 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 HOXB3P14651 431 aaPredicted RBP13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 WNT3P56703 355 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 TEX261Q6UWH6 196 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 OR10G8Q8NGN5 311 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 OR10J6PQ8NGY7 276 aa13.79□□□□□ -0.2
NUCKS1-201ENST00000367142 HELTA6NFD8 242 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 PATE3B3GLJ2 98 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 B4E171 279 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 SMPD2O60906 423 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 APELAP0DMC3 54 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 TSPAN7P41732 249 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 GAPTQ8N292 157 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 SLC2A9Q9NRM0 540 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 M0R143 59 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 SPINK2P20155 84 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 LRRC75BQ2VPJ9 315 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 MESTQ5EB52 335 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 COL13A1Q5TAT6 717 aaPredicted RBP13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 PET117Q6UWS5 81 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 ATG4DQ86TL0 474 aaPredicted RBP13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 SSMEM1Q8WWF3 244 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 IL22RA2Q969J5 263 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 LOXL4Q96JB6 756 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 WIPI2Q9Y4P8 454 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 HPXP02790 462 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 ADRA2AP08913 450 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 SULT1A2P50226 295 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 RPL31P62899 125 aaKnown RBP13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 ISXQ2M1V0 245 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 RPS4Y2Q8TD47 263 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 ZP3P21754 424 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 RELBQ01201 579 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 COL10A1Q03692 680 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 GBGT1Q8N5D6 347 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 NXF2Q9GZY0 626 aaKnown RBP13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 M0R3E3 92 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 PMS2P11Q13670 270 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 CLRN3Q8NCR9 226 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 CBY1Q9Y3M2 126 aa13.78□□□□□ -0.2
NUCKS1-201ENST00000367142 CORTO00230 105 aa13.77□□□□□ -0.2
NUCKS1-201ENST00000367142 LAMTOR1Q6IAA8 161 aa13.77□□□□□ -0.2
NUCKS1-201ENST00000367142 LRP11Q86VZ4 500 aa13.77□□□□□ -0.2
NUCKS1-201ENST00000367142 LPAR5Q9H1C0 372 aa13.77□□□□□ -0.2
NUCKS1-201ENST00000367142 TFPI2P48307 235 aa13.77□□□□□ -0.2
NUCKS1-201ENST00000367142 KLF7O75840 302 aaPredicted RBP13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 RAB9AP51151 201 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 METTL26Q96S19 204 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 FXYD1O00168 92 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 WNT9BO14905 357 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 SRSF10O75494 262 aaKnown RBP13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 GAPDHP04406 335 aaKnown RBP13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 FTH1P19P0C7X4 201 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 TCL1AP56279 114 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 PNRC1Q12796 327 aaPredicted RBP13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 HIST3H3Q16695 136 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 HLA-DRB5Q30154 266 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 CALHM1Q8IU99 346 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 RAX2Q96IS3 184 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 SLC6A13Q9NSD5 602 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 MRM2Q9UI43 246 aaKnown RBP13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 K7N7A8 449 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 IFNL4K9M1U5 179 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 PF4V1P10720 104 aa13.77□□□□□ -0.21
NUCKS1-201ENST00000367142 NPIPB6E9PJ23 425 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 CHST1O43916 411 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 FAM157CP0CG43 387 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 ERVS71-1P61550 626 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 CD226Q15762 336 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 TM4SF20Q53R12 229 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 FHL5Q5TD97 284 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 OR2W1Q9Y3N9 320 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 RBFOX3A6NFN3 312 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 CCL28Q9NRJ3 127 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 HSPB8Q9UJY1 196 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 BTAF1O14981 1849 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 RGS13O14921 159 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 RPS4XP62701 263 aaKnown RBP13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 BSXQ3C1V8 233 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 TEPPQ6URK8 271 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 ZNF841Q6ZN19 808 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 GVQW1Q8N7I0 195 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 SMRP1Q8NCR6 262 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 DDB2Q92466 427 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 RPL36A-HNRNPH2H7BZ11 118 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 PDE6DO43924 150 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 CXorf1O96002 111 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 TRAV34A0A0B4J273 112 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 MOB4Q9Y3A3 225 aa13.76□□□□□ -0.21
NUCKS1-201ENST00000367142 TTRP02766 147 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms