RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SIRT7Q9NRC8 400 aa12.68□□□□□ -0.38
PRKN-204ENST00000366896 PCSK5Q92824 1860 aa12.68□□□□□ -0.38
PRKN-204ENST00000366896 A0A0J9YW62 118 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 PPP1R2P9O14990 202 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 ST8SIA3O43173 380 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 DUSP1P28562 367 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 RND3P61587 244 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 GAMTQ14353 236 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 OR8B8Q15620 311 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 HAGHQ16775 308 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 KHDC3LQ587J8 217 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 OR52M1Q8NGK5 317 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 ZNF724A8MTY0 619 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 IFNA10P01566 189 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 PLA2G5P39877 138 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 PKIAP61925 76 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 DLK1P80370 383 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 GFI1BQ5VTD9 330 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 FBXW12Q6X9E4 464 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 LIAT1Q6ZQX7 453 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 RTN4IP1Q8WWV3 396 aaPredicted RBP12.67□□□□□ -0.38
PRKN-204ENST00000366896 REEP6Q96HR9 211 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 TECTBQ96PL2 329 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 SYT3Q9BQG1 590 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 KIAA1456Q9P272 454 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 DKKL1Q9UK85 242 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 SPTBN2O15020 2390 aa12.67□□□□□ -0.38
PRKN-204ENST00000366896 TGIF2-C20orf24A0A0A6YYL0 155 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 FAM221AA4D161 298 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 BTBD17A6NE02 478 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 OR6C6A6NF89 314 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 H0YL77 283 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 CBR3O75828 277 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 DDTP30046 118 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 SSR4P51571 173 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 RAC3P60763 192 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 ZNF774Q6NX45 483 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 CPT1CQ8TCG5 803 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 MEGF10Q96KG7 1140 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 RCL1Q9Y2P8 373 aaKnown RBP12.66□□□□□ -0.38
PRKN-204ENST00000366896 OR5H1A6NKK0 313 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 SLC31A2O15432 143 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 PATE4P0C8F1 98 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 GLI4P10075 376 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 NTF4P34130 210 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 NKX6-1P78426 367 aaPredicted RBP12.66□□□□□ -0.38
PRKN-204ENST00000366896 EWSR1Q01844 656 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRKN-204ENST00000366896 PIGYQ3MUY2 71 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 SP5Q6BEB4 398 aaPredicted RBP12.66□□□□□ -0.38
PRKN-204ENST00000366896 ZNF429Q86V71 674 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 MOB3AQ96BX8 217 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 BORCS8Q96FH0 119 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 BOD1Q96IK1 185 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 URGCP-MRPS24S4R325 110 aa12.66□□□□□ -0.38
PRKN-204ENST00000366896 CNTRLQ7Z7A1 2325 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 ARGFXA6NJG6 315 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 ZNF850A8MQ14 1090 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 PTBP3O95758 552 aaKnown RBP12.65□□□□□ -0.38
PRKN-204ENST00000366896 TRGC2P03986 189 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 TAS2R60P59551 318 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 FXYD4P59646 89 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 ABCA11PQ4W5N1 156 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 LGI3Q8N145 548 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 OR2G3Q8NGZ4 309 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 MSI2Q96DH6 328 aaKnown RBP12.65□□□□□ -0.38
PRKN-204ENST00000366896 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 ABHD14AQ9BUJ0 271 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 P4HTMQ9NXG6 502 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 CYB5BO43169 146 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 ATP6V0CP27449 155 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 GLIPR1P48060 266 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 ZNF468Q5VIY5 522 aaPredicted RBP12.65□□□□□ -0.38
PRKN-204ENST00000366896 VASH2Q86V25 355 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 DMRTC2Q8IXT2 367 aaPredicted RBP12.65□□□□□ -0.38
PRKN-204ENST00000366896 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 SLC2A9Q9NRM0 540 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 RFNGQ9Y644 331 aa12.65□□□□□ -0.38
PRKN-204ENST00000366896 IGKV1-12A0A0C4DH73 117 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 IGKV1D-12P01611 117 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 ASCL1P50553 236 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 FUT6P51993 359 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 CLN3Q13286 438 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 ZNF266Q14584 549 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 ICAM4Q14773 271 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 PHLDA2Q53GA4 152 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 PDZD11Q5EBL8 140 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 RIPPLY2Q5TAB7 128 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 TMEM211Q6ICI0 200 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 FBXL14Q8N1E6 418 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 OSR2Q8N2R0 312 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 CCDC71LQ8N9Z2 235 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 OR10AD1Q8NGE0 317 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 KCNE4Q8WWG9 221 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms