RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 A0A0U1RQV5 110 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 A6NDX4 124 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 C17orf98A8MV24 154 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 VGLL3A8MV65 326 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 PRR32B1ATL7 298 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 H3BSH0 61 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 J3QT63 122 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 MAGEB4O15481 346 aaPredicted RBP4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 NXPH2O95156 264 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 CST1P01037 141 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 NRASP01111 189 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 PGA5P0DJD9 388 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 ALOX5APP20292 161 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 VDAC2P45880 294 aaPredicted RBP4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 DLX6P56179 175 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 EDDM3BP56851 147 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 ESRRGP62508 458 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 BLCAPP62952 87 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 MS4A2Q01362 244 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 RIPPLY1Q0D2K3 151 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 APOFQ13790 326 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 EDDM3AQ14507 147 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 FAM98BQ52LJ0 330 aaKnown RBP4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 ZNF684Q5T5D7 378 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 TMEM236Q5W0B7 351 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 LCN8Q6JVE9 175 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 PLEKHG7Q6ZR37 379 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 ASRGL1Q7L266 308 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 TMEM179BQ7Z7N9 219 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 DHFR2Q86XF0 187 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 ZNF573Q86YE8 665 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 HS3ST5Q8IZT8 346 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 Q8N2B8 174 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 ASCC1Q8N9N2 400 aaKnown RBP4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 TRMT10AQ8TBZ6 339 aaKnown RBP4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 OR8B4Q96RC9 309 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 FAM110AQ9BQ89 295 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 NRIP2Q9BQI9 281 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 PBOV1Q9GZY1 135 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 MAGIXQ9H6Y5 334 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 MED4Q9NPJ6 270 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 NDE1Q9NXR1 346 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 RASL12Q9NYN1 266 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 ENPP5Q9UJA9 477 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 IKZF2Q9UKS7 526 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 COPS3Q9UNS2 423 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 LSM4Q9Y4Z0 139 aaKnown RBP4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 HILPDAQ9Y5L2 63 aa4.12□□□□□ -1.75
RNU4-4P-201ENST00000364588 FAM230AA0A1W2PPH8 454 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 A0A1W2PS18 150 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 PQLC2LA1A4F0 135 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 CCDC182A6NF36 153 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ODF3BA8MYP8 253 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 USP17L23D6RBM5 183 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 LOC110117498-PIK3R3F6TDL0 507 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 F8VVB4 439 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 F8VWA3 439 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 K7EIL1 84 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 GNGT2O14610 69 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 NOS1APO75052 506 aaPredicted RBP4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 DHRS3O75911 302 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 IGLV3-1P01715 115 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 TTRP02766 147 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 HMGN1P05114 100 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ZNF728P0DKX0 622 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 IGHV1-8P0DP01 117 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ATP6V1B1P15313 513 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 PRKACGP22612 351 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 SLC2A5P22732 501 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 CD24P25063 80 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 RIDAP52758 137 aaKnown RBP4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 OR12D2P58182 307 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 BRWD1-AS2P59051 145 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ACTA2P62736 377 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ACTG2P63267 376 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ACTC1P68032 377 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ACTA1P68133 377 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 CDK5Q00535 292 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 SLC34A1Q06495 639 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ARL16Q0P5N6 197 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ZNF829Q3KNS6 432 aaPredicted RBP4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 DEFB121Q5J5C9 76 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 SLC35D3Q5M8T2 416 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 VAX1Q5SQQ9 334 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 CLVS2Q5SYC1 327 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 C6orf141Q5SZD1 244 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 BCL2L15Q5TBC7 163 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 CCDC121Q6ZUS5 278 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 GDPD3Q7L5L3 318 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 KRT74Q7RTS7 529 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 TCF23Q7RTU1 214 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ANGPTL5Q86XS5 388 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 CALHM1Q8IU99 346 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 ZNF679Q8IYX0 411 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 TPRX1Q8N7U7 411 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 OR5AU1Q8NGC0 362 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 OR13D1Q8NGV5 346 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 NDNFQ8TB73 568 aa4.11□□□□□ -1.75
RNU4-4P-201ENST00000364588 CCDC124Q96CT7 223 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms