RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 WDR73Q6P4I2 378 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
CLIP1-203ENST00000361654 FAM222BQ8WU58 562 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 SNRNP40Q96DI7 357 aaKnown RBP9.6□□□□□ -0.87
CLIP1-203ENST00000361654 GDF15Q99988 308 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 ELOVL1Q9BW60 279 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 NKX6-2Q9C056 277 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-203ENST00000361654 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 HILPDAQ9Y5L2 63 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 CRHP06850 196 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 HLA-GP17693 338 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 UCP2P55851 309 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 SURF2Q15527 256 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-203ENST00000361654 DCAF12L2Q5VW00 463 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 FAM219BQ5XKK7 198 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 SAP25Q8TEE9 199 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 IGHV1-45A0A0A0MS14 117 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 A0A0B4J293 547 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 A1L4Q6 167 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 PRSS1P07477 247 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 RPL27AP46776 148 aaKnown RBP9.6□□□□□ -0.87
CLIP1-203ENST00000361654 HLA-DRB3P79483 266 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 RELBQ01201 579 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 CD226Q15762 336 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 GTF2H5Q6ZYL4 71 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 OR2C3Q8N628 320 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 OR4A5Q8NH83 315 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 DTD1Q8TEA8 209 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 RAB33BQ9H082 229 aa9.6□□□□□ -0.87
CLIP1-203ENST00000361654 A0A0A6YYJ9 748 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 SYNGR2O43760 224 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 TFPI2P48307 235 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 MEOX2P50222 304 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 RPEL1Q2QD12 228 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 RNFT1Q5M7Z0 435 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 LIMS2Q7Z4I7 341 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 OR4P4Q8NGL7 312 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 TMPRSS13Q9BYE2 586 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 CNTD2Q9H8S5 307 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 PLAC1Q9HBJ0 212 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 CORTO00230 105 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 CTSDP07339 412 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-203ENST00000361654 GZMKP49863 264 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 PSG6Q00889 435 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 UNQ5815/PRO19632Q6UWF5 114 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 ANXA10Q9UJ72 324 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 TRAPPC1Q9Y5R8 145 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 TRIM77I1YAP6 450 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 MPZL1O95297 269 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 USF1P22415 310 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-203ENST00000361654 BAK1Q16611 211 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 TMEM241Q24JQ0 296 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 CLEC12BQ2HXU8 276 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 LINC00303Q3SY05 128 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 CCL13Q99616 98 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 MRPL37Q9BZE1 423 aaKnown RBP9.59□□□□□ -0.87
CLIP1-203ENST00000361654 MRPS18BQ9Y676 258 aaKnown RBP9.59□□□□□ -0.87
CLIP1-203ENST00000361654 RGS13O14921 159 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 P01737 135 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 DLX1P56177 255 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF362Q5T0B9 420 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-203ENST00000361654 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 SLC25A33Q9BSK2 321 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 WASHC3Q9Y3C0 194 aa9.59□□□□□ -0.87
CLIP1-203ENST00000361654 ALS2Q96Q42 1657 aa9.59□□□□□ -0.88
CLIP1-203ENST00000361654 TMEM229AB2RXF0 380 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 COL8A1P27658 744 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 CCKARP32238 428 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 CLDN20P56880 219 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ETFDHQ16134 617 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 COX19Q49B96 90 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 TSPO2Q5TGU0 170 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 LSMEM1Q8N8F7 131 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 WDR89Q96FK6 387 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ANGPTL4Q9BY76 406 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 HIGD1AQ9Y241 93 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 B9A039 149 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 CLDN14O95500 239 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 C1QAP02745 245 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF883P0CG24 379 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 C11orf87Q6NUJ2 197 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 OR2V2Q96R30 315 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 EXOGQ9Y2C4 368 aaKnown RBP9.58□□□□□ -0.88
CLIP1-203ENST00000361654 LOC105371242A0A075B767 164 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 OR5AC1P0C628 307 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 CD1BP29016 333 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 COL10A1Q03692 680 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-203ENST00000361654 TMEM78Q5T7P6 136 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 MRM1Q6IN84 353 aaKnown RBP9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ZNF429Q86V71 674 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 IL22RA2Q969J5 263 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 C16orf92Q96LL3 132 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 Q9N2K0 584 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 MTFP1Q9UDX5 166 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 J3QR06 171 aa9.58□□□□□ -0.88
CLIP1-203ENST00000361654 ACAA1P09110 424 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms