RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 DTX4Q9Y2E6 619 aa3.62□□□□□ -1.83
SYNE2-204ENST00000358025 MRPS18CQ9Y3D5 142 aaKnown RBP3.62□□□□□ -1.83
SYNE2-204ENST00000358025 TRAV14DV4A0A0A6YYC5 116 aa3.62□□□□□ -1.83
SYNE2-204ENST00000358025 LIPT2A6NK58 231 aa3.62□□□□□ -1.83
SYNE2-204ENST00000358025 CEACAM5P06731 702 aa3.62□□□□□ -1.83
SYNE2-204ENST00000358025 C1orf53Q5VUE5 145 aa3.62□□□□□ -1.83
SYNE2-204ENST00000358025 C7orf71A4D174 169 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 DHHO43323 396 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 TNFSF12O43508 249 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZCCHC14Q8WYQ9 949 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CGGBP1Q9UFW8 167 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SHANK3Q9BYB0 1731 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZIC2O95409 532 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SRP19P09132 144 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 RAET1LQ5VY80 246 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF519Q8TB69 540 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 OR51E1Q8TCB6 317 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 MACROD1Q9BQ69 325 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM70Q9BUB7 260 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 LRIT1Q9P2V4 623 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 MCTS1Q9ULC4 181 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ROS1P08922 2347 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF735P0CB33 412 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 MEX3DQ86XN8 651 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CLDND2Q8NHS1 167 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 BSCL2Q96G97 398 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 IL23AQ9NPF7 189 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM30CPA0ZSE6 113 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 J3QR06 171 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 EN2P19622 333 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CCL1P22362 96 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF658BQ4V348 819 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 C17orf51A8MQB3 221 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 NUTF2P61970 127 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 VOPP1Q96AW1 172 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ELSPBP1Q96BH3 223 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 MEGF10Q96KG7 1140 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SIPA1L1O43166 1804 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 A0A1B0GV72 72 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 A0A1W2PPV9 198 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ORM1P02763 201 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 RAC1P63000 192 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 C9orf152Q5JTZ5 239 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 C11orf40Q8WZ69 217 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 PSENENQ9NZ42 101 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 PPYP01298 95 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 C1QTNF9P0C862 333 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CCR2P41597 374 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SLC25A53Q5H9E4 307 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 PLCXD3Q63HM9 321 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 MRPL37Q9BZE1 423 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 GSX1Q9H4S2 264 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF703Q9H7S9 590 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ADAM20O43506 726 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 DEFB115Q30KQ5 88 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 HIST3H2BBQ8N257 126 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ALKBH3Q96Q83 286 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 STAG3L3P0CL85 134 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CT45A6P0DMU7 189 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CT45A5P0DMU8 189 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CT45A7P0DMV0 189 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 VIPR2P41587 438 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 NANOS3P60323 173 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 C4orf17Q53FE4 359 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CT45A1Q5HYN5 189 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 WDFY1Q8IWB7 410 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZFP62Q8NB50 900 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CT45A3Q8NHU0 189 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 BARX1Q9HBU1 254 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 TRBV11-1A0A0K0K1C0 115 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 K7ESM1 405 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 NXPH2O95156 264 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 OR10J4P0C629 311 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 OR10AD1Q8NGE0 317 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 K7N7A8 449 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 P2RY10O00398 339 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CYB561D1Q8N8Q1 229 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 LINC01555Q8NAE3 123 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 MSL2Q9HCI7 577 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ATP23Q9Y6H3 246 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 LINC00271P0C7V0 271 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 IL11RAQ14626 422 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SLC16A13Q7RTY0 426 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ARHGAP5-AS1Q96IT6 56 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CREBZFQ9NS37 354 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 FLRT3Q9NZU0 649 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SBF1O95248 1867 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SDCBPO00560 298 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 HBZP02008 142 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 Q6ZN92 141 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF611Q8N823 705 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 OR4A16Q8NH70 328 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 C14orf144Q96I85 54 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 OSTCQ9NRP0 149 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 SYNGR2O43760 224 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 HIST1H1EP10412 219 aaKnown RBP3.61□□□□□ -1.83
SYNE2-204ENST00000358025 CLN3Q13286 438 aa3.61□□□□□ -1.83
SYNE2-204ENST00000358025 PQLC2Q6ZP29 291 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms