RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 GSN-AS1Q9NRJ2 163 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 OR51B2Q9Y5P1 312 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 TUBGCP6Q96RT7 1819 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 TRGV4A0A0C4DH28 118 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 SOD3P08294 240 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 RPL31P62899 125 aaKnown RBP5.12□□□□□ -1.59
BRCA1-203ENST00000357654 SLC35D3Q5M8T2 416 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 GLDNQ6ZMI3 551 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-203ENST00000357654 ZDHHC22Q8N966 263 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 OR10G4Q8NGN3 311 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 OR10G9Q8NGN4 311 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 OR10G7Q8NGN6 311 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 WFDC5Q8TCV5 224 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 ST8SIA1Q92185 356 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 JAM3Q9BX67 310 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 CST9LQ9H4G1 147 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 ZFP64Q9NPA5 681 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 GMPR2Q9P2T1 348 aaKnown RBP5.12□□□□□ -1.59
BRCA1-203ENST00000357654 WNT16Q9UBV4 365 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 DAPP1Q9UN19 280 aa5.12□□□□□ -1.59
BRCA1-203ENST00000357654 CXorf65A6NEN9 183 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SNRPGP15A8MWD9 76 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RER1O15258 196 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RNASE4P34096 147 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ZNF429Q86V71 674 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 AMER3Q8N944 861 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 FAM110DQ8TAY7 271 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TMEM38BQ9NVV0 291 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 HDGFL3Q9Y3E1 203 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RBMY1BA6NDE4 496 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RBMY1EA6NEQ0 496 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RBMY1DP0C7P1 496 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RBMY1A1P0DJD3 496 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RBMY1CP0DJD4 496 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SPI1P17947 270 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 EFNB2P52799 333 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SAPCD1Q5SSQ6 148 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SUMO4Q6EEV6 95 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ZNF66Q6ZN08 573 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 C10orf126Q8N4M7 172 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TMEM251Q8N6I4 163 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TPRX1Q8N7U7 411 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 PRSS27Q9BQR3 290 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SLC25A21Q9BQT8 299 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 R3HDMLQ9H3Y0 253 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 C7orf69Q9H7B7 122 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 IGHV3OR16-8A0A075B7F1 116 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TMEM200CA6NKL6 621 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 CELA2BP08218 269 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SLC6A1P30531 599 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 GATA4P43694 442 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ERVK11-1P61568 191 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 YBX1P67809 324 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ATP1A1-AS1Q5TC04 95 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 FAM159AQ6UWV7 190 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 OR13F1Q8NGS4 319 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 VSTM2AQ8TAG5 236 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 MS4A6EQ96DS6 147 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 GPR137Q96N19 417 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ZNF446Q9NWS9 450 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 MIOXQ9UGB7 285 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 INS-IGF2F8WCM5 200 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 INSP01308 110 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 FAM157CP0CG43 387 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SRD5A1P18405 259 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 FUT3P21217 361 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 CCR2P41597 374 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RBM11P57052 281 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TRA2AQ13595 282 aaKnown RBP eCLIP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 PRSS53Q2L4Q9 553 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 DMRTA1Q5VZB9 504 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 LDLRAD3Q86YD5 345 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ARIH2OSQ8N7S6 290 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SPSB4Q96A44 273 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 HIST1H4GQ99525 98 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 RPP25Q9BUL9 199 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 IGHV5-51A0A0C4DH38 117 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TSPOP30536 169 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 GUCA2AQ02747 115 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 OR52B4Q8NGK2 314 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 OR52I2Q8NH67 350 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 C7orf71A4D174 169 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SRSF10O75494 262 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 HIST1H1BP16401 226 aaKnown RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ZNF25P17030 456 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 CDKN1AP38936 164 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 PPICP45877 212 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 JOSD1Q15040 202 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TMEM196Q5HYL7 178 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 TTC32Q5I0X7 151 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 WDTC1Q8N5D0 677 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 KLHDC9Q8NEP7 349 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 OR1K1Q8NGR3 316 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 ZNF48Q96MX3 618 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 SEC11CQ9BY50 192 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 NKX6-2Q9C056 277 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-203ENST00000357654 NTN4Q9HB63 628 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 HSF4Q9ULV5 492 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 FLVCR2Q9UPI3 526 aa5.11□□□□□ -1.59
BRCA1-203ENST00000357654 PLPP1O14494 284 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms