RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 DOCK7Q96N67 2140 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 PTPRZ1P23471 2315 aaPredicted RBP5.91□□□□□ -1.46
RTN4-203ENST00000357376 ESPL1Q14674 2120 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 TRBV6-7A0A0A0MS04 114 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 BTBD17A6NE02 478 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 C9JQL5 133 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 SOX15O60248 233 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 IFNA10P01566 189 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 CFPP27918 469 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 PCOLCEQ15113 449 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 FAM209BQ5JX69 171 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 ZNF468Q5VIY5 522 aaPredicted RBP5.91□□□□□ -1.46
RTN4-203ENST00000357376 TMEM211Q6ICI0 200 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 CALHM1Q8IU99 346 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 DMBX1Q8NFW5 382 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 MOB3AQ96BX8 217 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 SSX3Q99909 188 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 SLC25A22Q9H936 323 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 ZNF391Q9UJN7 358 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 CDH23Q9H251 3354 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 PPP5D1E7EU14 171 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 PHOX2AO14813 284 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 PSG2P11465 335 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 HNF1AP20823 631 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 HLA-DRB3P79483 266 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 CATR1Q13166 79 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 NCR3LG1Q68D85 454 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 FAM58AQ8N1B3 248 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 FAM210BQ96KR6 192 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 SF3B5Q9BWJ5 86 aaKnown RBP5.91□□□□□ -1.46
RTN4-203ENST00000357376 TMEM222Q9H0R3 208 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 ENY2Q9NPA8 101 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 TMEM100Q9NV29 134 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 GNG12Q9UBI6 72 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 V9GYS6 101 aa5.91□□□□□ -1.46
RTN4-203ENST00000357376 TICRRQ7Z2Z1 1910 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 NUP210Q8TEM1 1887 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 IGHV1-45A0A0A0MS14 117 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 ZNF705FA8MVS1 300 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 LINC00587B1AMM8 73 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 IGHEP01854 428 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 ACAA1P09110 424 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 ZNF705DP0CH99 300 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 ZNF705BP0CI00 300 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 UBE2G2P60604 165 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 RND3P61587 244 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 TGFBR3Q03167 851 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 SRSF4Q08170 494 aaKnown RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 ZNF818PQ6ZRF7 136 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 FAM89BQ8N5H3 189 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 SNX22Q96L94 193 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 ATP5SQ99766 215 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 TM2D1Q9BX74 207 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 ANGPTL4Q9BY76 406 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 PNRC2Q9NPJ4 139 aaKnown RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 IL36RNQ9UBH0 155 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 A0A0G2JMM0 328 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 A0A1W2PPB8 328 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 A0A1W2PRS3 328 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 IGSF23A1L1A6 192 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 MAP1LC3B2A6NCE7 125 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 RNF212BA8MTL3 300 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 KIR3DP1A8MWS1 328 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 RPL36A-HNRNPH2H7BZ11 118 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 RFPL3SP0C7P2 107 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 ZNF17P17021 662 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 ANOS1P23352 680 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 CEACAM6P40199 344 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 GNG3P63215 75 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 HABP2Q14520 560 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 PDLIM3Q53GG5 364 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 C10orf128Q5T292 105 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 NSUN5P2Q63ZY6 315 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 LILRB1Q8NHL6 650 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 MAFAQ8NHW3 353 aaPredicted RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 RFESDQ8TAC1 157 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 RTL8AQ9BWD3 113 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 MAP1LC3BQ9GZQ8 125 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 ZNF665Q9H7R5 613 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 WFDC1Q9HC57 220 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 LIN7CQ9NUP9 197 aaKnown RBP5.9□□□□□ -1.46
RTN4-203ENST00000357376 HSF4Q9ULV5 492 aa5.9□□□□□ -1.46
RTN4-203ENST00000357376 MYO7BQ6PIF6 2116 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 CLDN34H7C241 214 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 ATXN7O15265 892 aaPredicted RBP5.9□□□□□ -1.47
RTN4-203ENST00000357376 SYNGR1O43759 233 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 RAB4BP61018 213 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 MST1LQ2TV78 715 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 ZNF880Q6PDB4 577 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 GCNT2Q8N0V5 402 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 OR10V1Q8NGI7 309 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 BOD1Q96IK1 185 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 C1orf147Q96MC9 270 aaPredicted RBP5.9□□□□□ -1.47
RTN4-203ENST00000357376 TECTBQ96PL2 329 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 WNT5BQ9H1J7 359 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 XIRP2A4UGR9 3374 aa5.9□□□□□ -1.47
RTN4-203ENST00000357376 CNOT1A5YKK6 2376 aaKnown RBP5.9□□□□□ -1.47
RTN4-203ENST00000357376 ICE1Q9Y2F5 2266 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TGIF2-C20orf24A0A0A6YYL0 155 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms