RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TMEM123Q8N131 208 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 RPRMLQ8N4K4 120 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF565Q8N9K5 539 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 MUCL1Q96DR8 90 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 Q96M66 194 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 C20orf24Q9BUV8 137 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 SUCNR1Q9BXA5 334 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 LIME1Q9H400 295 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 C11orf1Q9H5F2 150 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 PRORYQ9H606 182 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 NAA60Q9H7X0 242 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 ANXA10Q9UJ72 324 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 CACNA1BQ00975 2339 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 PCNX1Q96RV3 2341 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 CHATP28329 748 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 CDX1P47902 265 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 FHITP49789 147 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 UBE2V2Q15819 145 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 NUFIP2Q7Z417 695 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 CCDC54Q8NEL0 328 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 PP6455Q8WZ26 134 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 C10orf35Q96D05 121 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 ULBP2Q9BZM5 246 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 TOLLIPQ9H0E2 274 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 CRLF2Q9HC73 371 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 TREM2Q9NZC2 230 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 KCNIP3Q9Y2W7 256 aa10.89□□□□□ -0.67
RTFDC1-202ENST00000357348 A0A087WWC5 75 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 IFITM10A6NMD0 228 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 RAB2AP61019 212 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF283Q8N7M2 679 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 INTS12Q96CB8 462 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 S100A13Q99584 98 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 CHST5Q9GZS9 411 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 HSF4Q9ULV5 492 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 C5orf63A6NC05 138 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 OR5H8P0DN80 308 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 DTYMKP23919 212 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 HAAOP46952 286 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 PIGPP57054 158 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 OR2B8PP59922 312 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 HIKESHIQ53FT3 197 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 OR2B11Q5JQS5 317 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 DNLZQ5SXM8 178 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 TSPO2Q5TGU0 170 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 LIAT1Q6ZQX7 453 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 C6orf201Q7Z4U5 140 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 MSI2Q96DH6 328 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF701Q9NV72 531 aaPredicted RBP10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 TMED3Q9Y3Q3 217 aa10.88□□□□□ -0.67
RTFDC1-202ENST00000357348 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 DHRS3O75911 302 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 OR2C1O95371 312 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 SERPINA2P20848 420 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 PPP1CCP36873 323 aaKnown RBP10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 FOXG1P55316 489 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 NCMAPQ5T1S8 102 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 CLEC9AQ6UXN8 241 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 C20orf196Q8IYI0 205 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 CNEP1R1Q8N9A8 125 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 C9orf106Q8NAJ2 232 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 OR5D18Q8NGL1 313 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 TMEM54Q969K7 222 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 SH3BGRL3Q9H299 93 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 HIPK2Q9H2X6 1198 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 SLC7A10Q9NS82 523 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 FOXD3Q9UJU5 478 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 FBXO7Q9Y3I1 522 aa10.87□□□□□ -0.67
RTFDC1-202ENST00000357348 C1QL1O75973 258 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 SCGB1D2O95969 90 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 OR5AC1P0C628 307 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 DUSP1P28562 367 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 UCP3P55916 312 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 RNPS1Q15287 305 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 ACSF3Q4G176 576 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF324BQ6AW86 544 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 FOXL2NBQ6ZUU3 175 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 LYZL2Q7Z4W2 148 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 OR4D5Q8NGN0 318 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 CD300LFQ8TDQ1 290 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 PGAM5Q96HS1 289 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 OPA3Q9H6K4 179 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 NECAP2Q9NVZ3 263 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 CLCF1Q9UBD9 225 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 PRSS50Q9UI38 385 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 IGKV3D-15A0A087WSY6 115 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 TMEM8BA6NDV4 472 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 RPL36A-HNRNPH2H7BZ11 118 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 DHHO43323 396 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF728P0DKX0 622 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 FCGR2AP12318 317 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 OTX1P32242 354 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 GUCA1AP43080 201 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 TDGF1P3P51864 188 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 HIST1H3AP68431 136 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms