RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 FAM90A8PA6NJQ4 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A7PA6NKC0 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A22PA8MWA6 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A12PA8MX19 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A5PA8MXJ8 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A23PA8MXZ1 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A15PP0C7V4 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A13PP0C7W8 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A14PP0C7W9 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FAM90A24PP0C7X0 464 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 TEX30Q5JUR7 227 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FNDC7Q5VTL7 733 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 DTD1Q8TEA8 209 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 ABHD14BQ96IU4 210 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 DSPPQ9NZW4 1301 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 MFNGO00587 321 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 CD3EP07766 207 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 CXCL3P19876 107 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 CCKARP32238 428 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 DYNLT3P51808 116 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 CD81P60033 236 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 LGALSLQ3ZCW2 172 aaPredicted RBP10.3□□□□□ -0.76
COL9A1-202ENST00000357250 CD200R1LQ6Q8B3 271 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 OR2T10Q8NGZ9 312 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 TMEM37Q8WXS4 190 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 GPA33Q99795 319 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 RLFQ13129 1914 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 TRBV5-5A0A0J9YX44 114 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 AP4M1O00189 453 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 GEMIN2O14893 280 aaKnown RBP10.3□□□□□ -0.76
COL9A1-202ENST00000357250 HPXP02790 462 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 HOXD4P09016 255 aaPredicted RBP10.3□□□□□ -0.76
COL9A1-202ENST00000357250 GNG10P50151 68 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 TMEM183BQ1AE95 376 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 FBXW9Q5XUX1 488 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 ZDHHC16Q969W1 377 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 ANGPTL4Q9BY76 406 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 RNF7Q9UBF6 113 aa10.3□□□□□ -0.76
COL9A1-202ENST00000357250 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 PATE3B3GLJ2 98 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 CHST1O43916 411 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 FCARP24071 287 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 FCER1GP30273 86 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 BRS3P32247 399 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 PMELP40967 661 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
COL9A1-202ENST00000357250 C19orf57Q0VDD7 668 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 TUSC5Q8IXB3 177 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 FAM24BQ8N5W8 94 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 OR11H7Q8NGC8 314 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 NTMQ9P121 344 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 ONECUT1Q9UBC0 465 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 TEX50A0A1B0GTY4 177 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 A0A1W2PPC1 479 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
COL9A1-202ENST00000357250 IGHV4-34P06331 123 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 CCL3P10147 92 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 SPEM2Q0P670 501 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 PLPPR5Q32ZL2 321 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 ALKBH6Q3KRA9 238 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 OR10AC1Q8NH08 325 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 APOBEC4Q8WW27 367 aaKnown RBP10.29□□□□□ -0.76
COL9A1-202ENST00000357250 MISP3Q96FF7 219 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 PIPOXQ9P0Z9 390 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
COL9A1-202ENST00000357250 PDE6DO43924 150 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 GAPDHP04406 335 aaKnown RBP10.29□□□□□ -0.76
COL9A1-202ENST00000357250 VASH2Q86V25 355 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 GAPTQ8N292 157 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 ZNF501Q96CX3 271 aaPredicted RBP10.29□□□□□ -0.76
COL9A1-202ENST00000357250 MS4A5Q9H3V2 200 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 SLC25A22Q9H936 323 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 ACACAQ13085 2346 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 LEUTXA8MZ59 168 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 FCN1O00602 326 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 ZFP36L2P47974 494 aaKnown RBP10.29□□□□□ -0.76
COL9A1-202ENST00000357250 CSRP3P50461 194 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 CLEC12BQ2HXU8 276 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 SPINK14Q6IE38 97 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 PET117Q6UWS5 81 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 DEFB124Q8NES8 71 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 OR10D4PQ8NGN7 298 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 TNFSF18Q9UNG2 199 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 R4GN57 208 aa10.29□□□□□ -0.76
COL9A1-202ENST00000357250 DEFB108AA8MXU0 73 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 ISG15P05161 165 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 FABP4P15090 132 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 SOX8P57073 446 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 VAMP3Q15836 100 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 ANKRD55Q3KP44 614 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 TMEM52Q8NDY8 209 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 POM121Q96HA1 1249 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 MS4A10Q96PG2 267 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 ZNF665Q9H7R5 613 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 SLC7A10Q9NS82 523 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 ZNF318Q5VUA4 2279 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 MED12Q93074 2177 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 OTOFQ9HC10 1997 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 DHRS7CA6NNS2 312 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms