RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 DYRK2Q92630 601 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 UCN2Q96RP3 112 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZPBPQ9BS86 351 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 IFI6P09912 130 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 TMEM50BP56557 158 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 WDR73Q6P4I2 378 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 AQP3Q92482 292 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 FAM122AQ96E09 287 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 PLA2G3Q9NZ20 509 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 ANKRD31Q8N7Z5 1873 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 CACNA1DQ01668 2161 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 RUNX1Q01196 453 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 TRA2AQ13595 282 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 H1FOOQ8IZA3 346 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 MRPL30Q8TCC3 161 aaKnown RBP13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 MRGPRDQ8TDS7 321 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 DTD1Q8TEA8 209 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR10C1Q96KK4 312 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR2W1Q9Y3N9 320 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 IGHV3-43A0A0B4J1X8 118 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZNF253O75346 499 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 IGHV3-43DP0DP04 118 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 ARL16Q0P5N6 197 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 LYG1Q8N1E2 194 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZNF318Q5VUA4 2279 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 A0A1W2PQF6 199 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 J3QR89 54 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 FCGR3AP08637 254 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 GAB4Q2WGN9 574 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 FAM209BQ5JX69 171 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 RNASEKQ6P5S7 137 aaKnown RBP13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 SH2D2AQ9NP31 389 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 SCN4AP35499 1836 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 PAGE4O60829 102 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 THY1P04216 161 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR2Z1Q8NG97 314 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 NEUROG3Q9Y4Z2 214 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 A0A1W2PR80 420 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 LMX1BO60663 402 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR2M3Q8NG83 312 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 APOBEC4Q8WW27 367 aaKnown RBP13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 CTHRC1Q96CG8 243 aa13.65□□□□□ -0.22
TRAPPC11-202ENST00000357207 A0A0U1RQV5 110 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 ST8SIA5O15466 376 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 PITX3O75364 302 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 CD8AP01732 235 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 SMIM10L1P0DMW3 83 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 SPINK2P20155 84 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 RPEL1Q2QD12 228 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 ANKRD55Q3KP44 614 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 TRAT1Q6PIZ9 186 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 SMIM10Q96HG1 83 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 TMEM56Q96MV1 263 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 CTXND1A0A1B0GTU2 59 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 CLEC3BP05452 202 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 STUMQ69YW2 141 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 HSF4Q9ULV5 492 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 ATP23Q9Y6H3 246 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 BCL3P20749 454 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 FHL5Q5TD97 284 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 FDX2Q6P4F2 183 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 FA2HQ7L5A8 372 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 SLC36A1Q7Z2H8 476 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 ZNF385AQ96PM9 386 aaKnown RBP13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR51M1Q9H341 326 aa13.64□□□□□ -0.23
TRAPPC11-202ENST00000357207 A8MXK9 166 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 RPL36A-HNRNPH2H7BZ11 118 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 CD74P04233 296 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 HKR1P10072 659 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 BCL2P10415 239 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 SERF2P84101 59 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 COX19Q49B96 90 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR2H1Q9GZK4 316 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 LOC105371267A0A1B0GV96 52 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 FCARP24071 287 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 TMEM255AQ5JRV8 349 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 TEX30Q5JUR7 227 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 BET1LQ9NYM9 111 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 MYO16Q9Y6X6 1858 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 SPRY3O43610 288 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 TSPAN2O60636 221 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 TRGC2P03986 189 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 IL11P20809 199 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 CEBPEQ15744 281 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 KCNK17Q96T54 332 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 NDFIP1Q9BT67 221 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 ANGPTL4Q9BY76 406 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 ACAA1P09110 424 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 MDKP21741 143 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 DHRS7BQ6IAN0 325 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 DHRS11Q6UWP2 260 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 GTF2H5Q6ZYL4 71 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 C5orf66Q9H5L9 145 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 TMEM38BQ9NVV0 291 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 SLC2A8Q9NY64 477 aa13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 COL11A2P13942 1736 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC11-202ENST00000357207 IGKV1D-42A0A075B6H8 117 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 TNFSF15O95150 251 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms