RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 CACNA1CQ13936 2221 aa14.15□□□□□ -0.14
RXRA-201ENST00000356384 ACAA1P09110 424 aaPredicted RBP14.15□□□□□ -0.14
RXRA-201ENST00000356384 LHX8Q68G74 356 aa14.15□□□□□ -0.14
RXRA-201ENST00000356384 BPIFA4PQ86YQ2 179 aa14.15□□□□□ -0.14
RXRA-201ENST00000356384 VAX2Q9UIW0 290 aa14.15□□□□□ -0.14
RXRA-201ENST00000356384 AGFG2O95081 481 aa14.15□□□□□ -0.15
RXRA-201ENST00000356384 SRSF5Q13243 272 aaKnown RBP14.15□□□□□ -0.15
RXRA-201ENST00000356384 SLC23A3Q6PIS1 610 aa14.15□□□□□ -0.15
RXRA-201ENST00000356384 OR6X1Q8NH79 312 aa14.15□□□□□ -0.15
RXRA-201ENST00000356384 RPS4Y2Q8TD47 263 aa14.15□□□□□ -0.15
RXRA-201ENST00000356384 CXCL10P02778 98 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 MUC15Q8N387 334 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 DYNLRB2Q8TF09 96 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 HSPB8Q9UJY1 196 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 TINAGQ9UJW2 476 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 KCNE1BA0A087WTH5 132 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 APCSP02743 223 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 WNT5AP41221 380 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 COX19Q49B96 90 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 ATG101Q9BSB4 218 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 C1RLQ9NZP8 487 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 IGHV3-21A0A0B4J1V1 117 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 TMEM218A2RU14 115 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 IFITM10A6NMD0 228 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 COL19A1Q14993 1142 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 KIAA0040Q15053 153 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 C21orf62-AS1Q17RA5 79 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 LBHQ53QV2 105 aaPredicted RBP14.14□□□□□ -0.15
RXRA-201ENST00000356384 OR1N2Q8NGR9 330 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 SNRNP40Q96DI7 357 aaKnown RBP14.14□□□□□ -0.15
RXRA-201ENST00000356384 SLC25A33Q9BSK2 321 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 ANGPTL4Q9BY76 406 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 PLA2G2FQ9BZM2 168 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 SAP30LQ9HAJ7 183 aa14.14□□□□□ -0.15
RXRA-201ENST00000356384 AURKAIP1Q9NWT8 199 aaPredicted RBP14.14□□□□□ -0.15
RXRA-201ENST00000356384 SNURFLB1AK76 121 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 KLF7O75840 302 aaPredicted RBP14.13□□□□□ -0.15
RXRA-201ENST00000356384 CD226Q15762 336 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 PWWP2BQ6NUJ5 590 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 FAHD2BQ6P2I3 314 aaPredicted RBP14.13□□□□□ -0.15
RXRA-201ENST00000356384 FAHD2AQ96GK7 314 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 MRGPRX3Q96LB0 322 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 TBX15Q96SF7 602 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 CELA2BP08218 269 aaPredicted RBP14.13□□□□□ -0.15
RXRA-201ENST00000356384 SLC35E3Q7Z769 313 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 PTP4A1Q93096 173 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 MRPL24Q96A35 216 aaKnown RBP14.13□□□□□ -0.15
RXRA-201ENST00000356384 WNK3Q9BYP7 1800 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 FBLL1A6NHQ2 334 aaKnown RBP14.13□□□□□ -0.15
RXRA-201ENST00000356384 FAM219AQ8IW50 185 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 HSF4Q9ULV5 492 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 TMEM255AQ5JRV8 349 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 RNFT1Q5M7Z0 435 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 INSIG2Q9Y5U4 225 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 CRHP06850 196 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 ECSCRQ19T08 205 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 IGSF11Q5DX21 431 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 RAB33BQ9H082 229 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 PAM16Q9Y3D7 125 aa14.13□□□□□ -0.15
RXRA-201ENST00000356384 ZNF25P17030 456 aaPredicted RBP14.12□□□□□ -0.15
RXRA-201ENST00000356384 RAC3P60763 192 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 CD300LDQ6UXZ3 194 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 MRGPRFQ96AM1 343 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 HARBI1Q96MB7 349 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 RALYQ9UKM9 306 aaKnown RBP14.12□□□□□ -0.15
RXRA-201ENST00000356384 VDAC1P21796 283 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 OR10J1P30954 320 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 SURF2Q15527 256 aaPredicted RBP14.12□□□□□ -0.15
RXRA-201ENST00000356384 ZNF383Q8NA42 475 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 LOC389332A0A1B0GUA5 103 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 PEX11BO96011 259 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 PPYP01298 95 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 MESTQ5EB52 335 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 SPANXN1Q5VSR9 72 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 MIEN1Q9BRT3 115 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 KCNMB2Q9Y691 235 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 TRAV39A0A0B4J263 110 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 C7orf77A4D0Y5 90 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 EML2O95834 649 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 IGF2P01344 180 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 PNLIPP16233 465 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 LDLRAD3Q86YD5 345 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 OR1K1Q8NGR3 316 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 VN1R17PQ8TDU5 208 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 GPBAR1Q8TDU6 330 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 CT55Q8WUE5 264 aa14.12□□□□□ -0.15
RXRA-201ENST00000356384 M0R296 226 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 ISLRO14498 428 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 RPLP1P05386 114 aaKnown RBP14.11□□□□□ -0.15
RXRA-201ENST00000356384 HIST1H1EP10412 219 aaKnown RBP14.11□□□□□ -0.15
RXRA-201ENST00000356384 EWSR1Q01844 656 aaKnown RBP eCLIP14.11□□□□□ -0.152e-6■■■■□ 24.7
RXRA-201ENST00000356384 DMKNQ6E0U4 476 aaPredicted RBP14.11□□□□□ -0.15
RXRA-201ENST00000356384 BVESQ8NE79 360 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 OR4D9Q8NGE8 314 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 FRRS1LQ9P0K9 344 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 RNF7Q9UBF6 113 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 ZNF256Q9Y2P7 627 aaPredicted RBP14.11□□□□□ -0.15
RXRA-201ENST00000356384 SCGB1A1P11684 91 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 CLDN18P56856 261 aa14.11□□□□□ -0.15
RXRA-201ENST00000356384 TRIP6Q15654 476 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms