RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TMEM138Q9NPI0 162 aa13.37□□□□□ -0.27
PDLIM7-201ENST00000355572 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
PDLIM7-201ENST00000355572 ST3GAL6Q9Y274 331 aa13.37□□□□□ -0.27
PDLIM7-201ENST00000355572 PCDHGB5Q9Y5G0 923 aa13.37□□□□□ -0.27
PDLIM7-201ENST00000355572 NOTCH1P46531 2555 aa13.37□□□□□ -0.27
PDLIM7-201ENST00000355572 NPIPB11E5RHQ5 1161 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 GPX5O75715 221 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 CD2P06729 351 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 MYL12AP19105 171 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 C2orf68Q2NKX9 166 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 Q499Y3 187 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 Q6ZTK2 550 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 RTN4RL2Q86UN3 420 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 C8orf59Q8N0T1 100 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 OSR2Q8N2R0 312 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 SETD9Q8NE22 299 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 BPIFB6Q8NFQ5 453 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 DPCDQ9BVM2 203 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 LINC00574Q9H8X3 128 aa13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 PAK1IP1Q9NWT1 392 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-201ENST00000355572 IRGMA1A4Y4 181 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 FUOMA2VDF0 154 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 G3V4G9 280 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 IL1AP01583 271 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 FSTP19883 344 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 VHLP40337 213 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 PAX5Q02548 391 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 RBM39Q14498 530 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 SLC22A6Q4U2R8 563 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 FAM27D1Q5T7N8 215 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 OR52W1Q6IF63 320 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 OR4D6Q8NGJ1 314 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 TFAP2CQ92754 450 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 MUL1Q969V5 352 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 DERL3Q96Q80 235 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 CITED2Q99967 270 aaPredicted RBP13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 PLCXD1Q9NUJ7 323 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 IDI2-AS1Q9NZ38 188 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 OR6C3Q9NZP0 311 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 PSG11Q9UQ72 335 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 HSPE1-MOB4S4R3N1 261 aa13.35□□□□□ -0.27
PDLIM7-201ENST00000355572 A0A1W2PPI3 338 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 C15orf65H3BRN8 121 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 J3QR06 171 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 MAGEB3O15480 346 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 GNG10P50151 68 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 PPP3R1P63098 170 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 NSUN5P1Q3KNT7 163 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 YIF1BQ5BJH7 314 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 TCTEX1D4Q5JR98 221 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 NANOGP1Q8N7R0 232 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 ZNF596Q8TC21 504 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 SLC25A33Q9BSK2 321 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 PRSS22Q9GZN4 317 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 METTL9Q9H1A3 318 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 MMP28Q9H239 520 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 IFT22Q9H7X7 185 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 C8orf4Q9NR00 106 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 CNOT2Q9NZN8 540 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 PITPNC1Q9UKF7 332 aa13.34□□□□□ -0.27
PDLIM7-201ENST00000355572 EFCAB10A6NFE3 127 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 LEUTXA8MZ59 168 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 FBXO24O75426 580 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 OR7C1O76099 320 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 MAS1P04201 325 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 CELP19835 753 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 WNT4P56705 351 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 SIGIRRQ6IA17 410 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 TMEM104Q8NE00 496 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 OR9G1Q8NH87 305 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 CCDC107Q8WV48 283 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 KCNK15Q9H427 330 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 NCOR1P1Q9H4R4 102 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 BANF2Q9H503 90 aa13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 LSM2Q9Y333 95 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-201ENST00000355572 IGHV3-43A0A0B4J1X8 118 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A18PA6NE21 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A16PA6NEW6 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A20PA6NIJ5 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A9PA6NNJ1 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A12PA8MX19 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A5PA8MXJ8 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A15PP0C7V4 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A13PP0C7W8 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A14PP0C7W9 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM90A24PP0C7X0 464 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 IGHV3-43DP0DP04 118 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 AQP4P55087 323 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 ABCA11PQ4W5N1 156 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 C11orf88Q6PI97 169 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 GLIPR1L1Q6UWM5 242 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 RBM14Q96PK6 669 aaKnown RBP13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 BARHL1Q9BZE3 327 aa13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 MRPS28Q9Y2Q9 187 aaKnown RBP13.32□□□□□ -0.28
PDLIM7-201ENST00000355572 TOR1AO14656 332 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 SLC31A2O15432 143 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 OR2F2O95006 317 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 PRB2P02812 416 aaPredicted RBP13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 CSTBP04080 98 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms