RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MRPL24Q96A35 216 aaKnown RBP13.1□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF665Q9H7R5 613 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 RNF7Q9UBF6 113 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 WDFY1Q8IWB7 410 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 VN1R17PQ8TDU5 208 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 GPBAR1Q8TDU6 330 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
LMX1B-201ENST00000355497 TCRBV16S1A1N1A0A5B0 115 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 PPYP01298 95 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 COMPP49747 757 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF137PP52743 207 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 MESTQ5EB52 335 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 CARFQ8N187 725 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 MAFAQ8NHW3 353 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-201ENST00000355497 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 CDC42EP2O14613 210 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
LMX1B-201ENST00000355497 PARP11Q9NR21 331 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 TREM2Q9NZC2 230 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-201ENST00000355497 GZMHP20718 246 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 NMUP48645 174 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 PRSS12P56730 875 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 RAC3P60763 192 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 ABHD3Q8WU67 409 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 CES1P1Q9UKY3 287 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 IGKV3-7A0A075B6H7 116 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 K7ERU9 68 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF324O75467 553 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-201ENST00000355497 HOXC4P09017 264 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-201ENST00000355497 UQCRFS1P47985 274 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 TCTAP57738 103 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 PAFAH1B2P68402 229 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 SMUG1Q53HV7 270 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 SPANXN1Q5VSR9 72 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 PWWP2BQ6NUJ5 590 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 TEPPQ6URK8 271 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 ZG16BQ96DA0 208 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 ADAT3Q96EY9 351 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-201ENST00000355497 HEXA-AS1Q9H8Q6 139 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 FRRS1LQ9P0K9 344 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 NUMA1Q14980 2115 aa13.09□□□□□ -0.31
LMX1B-201ENST00000355497 A0A1B0GU03 582 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 IGF2P01344 180 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 SPEM2Q0P670 501 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 GABRA6Q16445 453 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 LINC00596Q86U02 117 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 ARL6IP6Q8N6S5 226 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 LSMEM1Q8N8F7 131 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 FAM222BQ8WU58 562 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 ST6GAL2Q96JF0 529 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 VSTM2LQ96N03 204 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.31
LMX1B-201ENST00000355497 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.32
LMX1B-201ENST00000355497 CT62P0C5K7 136 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 KIR3DL2P43630 455 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 DEFB124Q8NES8 71 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 RAB33BQ9H082 229 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 PAM16Q9Y3D7 125 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 MAST2Q6P0Q8 1798 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 PHIPQ8WWQ0 1821 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 MPLP40238 635 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 EMP1P54849 157 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 SOX8P57073 446 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 C19orf57Q0VDD7 668 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 LDLRAD3Q86YD5 345 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 OR10AC1Q8NH08 325 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 GPR61Q9BZJ8 451 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 SAP30LQ9HAJ7 183 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 V9GYH0 126 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 A0A1W2PQD3 144 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 DIRC3C9JPN6 131 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 UBE2L6O14933 153 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 NUDT3O95989 172 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 WNT5AP41221 380 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 HARBI1Q96MB7 349 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 CTXND1A0A1B0GTU2 59 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 NKX2-6A6NCS4 301 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 PEX11BO96011 259 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 COX6CP09669 75 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 SPINK14Q6IE38 97 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 C16orf47Q6ZP98 133 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-201ENST00000355497 WFDC3Q8IUB2 231 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 NFAM1Q8NET5 270 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-201ENST00000355497 UBTD1Q9HAC8 227 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 PIPOXQ9P0Z9 390 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 HIGD1AQ9Y241 93 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 INSIG2Q9Y5U4 225 aa13.08□□□□□ -0.32
LMX1B-201ENST00000355497 CBLN3Q6UW01 205 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 C16orf82Q7Z2V1 217 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 MRGPRFQ96AM1 343 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 MEGF10Q96KG7 1140 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 NTMQ9P121 344 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 OR2W1Q9Y3N9 320 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 TMSB15BA0A087X1C1 80 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms