RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
PDGFA-201ENST00000354513 AKR1E2Q96JD6 320 aa12.58□□□□□ -0.4
PDGFA-201ENST00000354513 C4orf36Q96KX1 117 aa12.58□□□□□ -0.4
PDGFA-201ENST00000354513 MYCBPQ99417 103 aaPredicted RBP12.58□□□□□ -0.4
PDGFA-201ENST00000354513 DUSP21Q9H596 190 aa12.58□□□□□ -0.4
PDGFA-201ENST00000354513 ZCCHC4Q9H5U6 513 aa12.58□□□□□ -0.4
PDGFA-201ENST00000354513 ZNF581Q9P0T4 197 aa12.58□□□□□ -0.4
PDGFA-201ENST00000354513 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 J3QLW9 94 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 RGS10O43665 173 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 LIMS3P0CW19 117 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 LIMS4P0CW20 117 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 ZNF19P17023 458 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 HOXD3P31249 432 aaPredicted RBP12.57□□□□□ -0.4
PDGFA-201ENST00000354513 GABARAPL2P60520 117 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 KCTD20Q7Z5Y7 419 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 OSR2Q8N2R0 312 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 CHST4Q8NCG5 386 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 OR4X2Q8NGF9 303 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 OR51T1Q8NGJ9 327 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 PLPPR1Q8TBJ4 325 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 RCC1LQ96I51 464 aaKnown RBP12.57□□□□□ -0.4
PDGFA-201ENST00000354513 CCDC90BQ9GZT6 254 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 ISG20L2Q9H9L3 353 aaKnown RBP12.57□□□□□ -0.4
PDGFA-201ENST00000354513 RHOFQ9HBH0 211 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 CLEC2DQ9UHP7 191 aa12.57□□□□□ -0.4
PDGFA-201ENST00000354513 KBTBD11-OT1A0A1B0GTJ5 212 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 FUOMA2VDF0 154 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 OOSP1A8MZH6 123 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 E9PI62 339 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 HSPB6O14558 160 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 IGHV3-7P01780 117 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
PDGFA-201ENST00000354513 CEACAM3P40198 252 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 RBM39Q14498 530 aaKnown RBP12.56□□□□□ -0.4
PDGFA-201ENST00000354513 KISS1Q15726 138 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 ZNF529Q6P280 563 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 TMPRSS11AQ6ZMR5 421 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 OR4D6Q8NGJ1 314 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 OR9G1Q8NH87 305 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 RGP1Q92546 391 aaPredicted RBP12.56□□□□□ -0.4
PDGFA-201ENST00000354513 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 NEK6Q9HC98 313 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 CALYQ9NYX4 217 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 KIF25Q9UIL4 384 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 MOB4Q9Y3A3 225 aa12.56□□□□□ -0.4
PDGFA-201ENST00000354513 GABRPO00591 440 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 TOR1AO14656 332 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 DEGS1O15121 323 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 ZFPL1O95159 310 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 NFYBP25208 207 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 GLP1RP43220 463 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 KHDC1LQ5JSQ8 128 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 C9orf152Q5JTZ5 239 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 OR2G6Q5TZ20 316 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 RSBN1Q5VWQ0 802 aaPredicted RBP12.55□□□□□ -0.4
PDGFA-201ENST00000354513 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 PRSS48Q7RTY5 328 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 ZNF329Q86UD4 541 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 MRPL41Q8IXM3 137 aaKnown RBP12.55□□□□□ -0.4
PDGFA-201ENST00000354513 SYS1Q8N2H4 156 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 PARP16Q8N5Y8 322 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 C5orf56Q8N8D9 126 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 OR51A2Q8NGJ7 313 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 OR56B4Q8NH76 319 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 CAPSLQ8WWF8 208 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 NOL4LQ96MY1 436 aaPredicted RBP12.55□□□□□ -0.4
PDGFA-201ENST00000354513 ERGIC3Q9Y282 383 aa12.55□□□□□ -0.4
PDGFA-201ENST00000354513 PSMB11A5LHX3 300 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 NPIPB11E5RHQ5 1161 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 J3QR06 171 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 MYL12BO14950 172 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 SULT1B1O43704 296 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 TNFAIP8O95379 198 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 IL1AP01583 271 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 HCKP08631 526 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 MTNR1BP49286 362 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 ARHGDIBP52566 201 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 PRRX1P54821 245 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 KCTD21Q4G0X4 260 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 VAX1Q5SQQ9 334 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 RNLSQ5VYX0 342 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 THNSL2Q86YJ6 484 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 DRAM1Q8N682 238 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 TOMM40LQ969M1 308 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 CREB3L1Q96BA8 519 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 PDCD1LG2Q9BQ51 273 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 IDI2-AS1Q9NZ38 188 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 PSG11Q9UQ72 335 aa12.54□□□□□ -0.4
PDGFA-201ENST00000354513 TRAV39A0A0B4J263 110 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 M0QZK8 103 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 MRPS14O60783 128 aaKnown RBP12.53□□□□□ -0.4
PDGFA-201ENST00000354513 TMEM225BP0DP42 221 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 SSTR5P35346 364 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 MNDAP41218 407 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 THBS3P49746 956 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 RPL23AP62750 156 aaKnown RBP12.53□□□□□ -0.4
PDGFA-201ENST00000354513 PAX5Q02548 391 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms