RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 RBFOX2O43251 390 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 AKR7A3O95154 331 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 OR4A8P0C604 315 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 CA7P43166 264 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 ZNF121P58317 390 aaPredicted RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 LAMTOR2Q9Y2Q5 125 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 LRP12Q9Y561 859 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 DPTQ07507 201 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 NOGQ13253 232 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 UBALD2Q8IYN6 164 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 THAP3Q8WTV1 239 aaPredicted RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 QTRT1Q9BXR0 403 aaKnown RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 A0A087WUJ7 227 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 A0A1W2PP55 124 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 ADIPOQQ15848 244 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 LSM10Q969L4 123 aaKnown RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 HS3ST1O14792 307 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 EDDM3BP56851 147 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 MLF1P58340 268 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 TMEM215Q68D42 235 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 MS4A18H0YCH9 400 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 PRTGQ2VWP7 1150 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 MS4A18Q3C1V0 323 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 SNRNP40Q96DI7 357 aaKnown RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 WNT6Q9Y6F9 365 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 ZNF716A6NP11 495 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 PPICP45877 212 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 MFAP2P55001 183 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 EWSR1Q01844 656 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 FZD5Q13467 585 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 KISS1Q15726 138 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 PRICKLE4Q2TBC4 344 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 PI3P19957 117 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 SRSF5Q13243 272 aaKnown RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 SLC35E4Q6ICL7 350 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 IP6K3Q96PC2 410 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 ICAM5Q9UMF0 924 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 TNRC6AQ8NDV7 1962 aaKnown RBP11.2□□□□□ -0.62
COL6A3-203ENST00000353578 NXPH3O95157 252 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 SELENOTP62341 195 aa11.2□□□□□ -0.62
COL6A3-203ENST00000353578 MPZL1O95297 269 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 C11orf40Q8WZ69 217 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 RRADP55042 308 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 TSPAN32Q96QS1 320 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 FLRT3Q9NZU0 649 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 SPCS1Q9Y6A9 102 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 SNAI3Q3KNW1 292 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 Q6AWC8 147 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 CD1BP29016 333 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 HSD11B1LQ7Z5J1 315 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 GAS2L1Q99501 681 aaPredicted RBP11.19□□□□□ -0.62
COL6A3-203ENST00000353578 RNFT1Q5M7Z0 435 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 CDC14CA4D256 554 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 TMPRSS11DO60235 418 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 HKR1P10072 659 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 GGTLC2Q14390 218 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 RPS19BP1Q86WX3 136 aaKnown RBP11.19□□□□□ -0.62
COL6A3-203ENST00000353578 PRSS21Q9Y6M0 314 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 FSTP19883 344 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 CD70P32970 193 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 LGALS4P56470 323 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 SRYQ05066 204 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 TNFRSF14Q92956 283 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 OR4C46A6NHA9 309 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 MRPL58Q14197 206 aaKnown RBP11.19□□□□□ -0.62
COL6A3-203ENST00000353578 FAM27D1Q5T7N8 215 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 TEPPQ6URK8 271 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 TIMD4Q96H15 378 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 PRDM13Q9H4Q3 707 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 DUSP13Q9UII6 198 aa11.19□□□□□ -0.62
COL6A3-203ENST00000353578 FRG2CA6NGY1 282 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 METRNLQ641Q3 311 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 KBTBD11O94819 623 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 P2RY4P51582 365 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 MORN4Q8NDC4 146 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 NOXO1Q8NFA2 376 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 DAPP1Q9UN19 280 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 C7orf71A4D174 169 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 MBLAC1A4D2B0 266 aaPredicted RBP11.18□□□□□ -0.62
COL6A3-203ENST00000353578 IGFBP4P22692 258 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 FGF8P55075 233 aaPredicted RBP11.18□□□□□ -0.62
COL6A3-203ENST00000353578 SLC25A26Q70HW3 274 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 PARLQ9H300 379 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 ZNF346Q9UL40 294 aaKnown RBP11.18□□□□□ -0.62
COL6A3-203ENST00000353578 M0QZ24 198 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 SSX8Q7RTT4 187 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 GMLQ99445 158 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
COL6A3-203ENST00000353578 SBF2Q86WG5 1849 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 ONECUT2O95948 504 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 CD74P04233 296 aa11.18□□□□□ -0.62
COL6A3-203ENST00000353578 C8orf82Q6P1X6 216 aaPredicted RBP11.18□□□□□ -0.62
COL6A3-203ENST00000353578 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
COL6A3-203ENST00000353578 OR11G2Q8NGC1 345 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms