RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 COX6A1P12074 109 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 IL24Q13007 206 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 OR1B1Q8NGR6 318 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 OR1L1Q8NH94 360 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 ZDHHC8Q9ULC8 765 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 PCM1Q15154 2024 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 ADRB1P08588 477 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 SLC35B1P78383 322 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 GAMTQ14353 236 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 CDCP2Q5VXM1 449 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 XAF1Q6GPH4 301 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 FA2HQ7L5A8 372 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 ZNF714Q96N38 554 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 SCN3AQ9NY46 2000 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 AESQ08117 197 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 ECSCRQ19T08 205 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 OR10A7Q8NGE5 316 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 OR2V2Q96R30 315 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 RIF1Q5UIP0 2472 aaKnown RBP13.48□□□□□ -0.25
PTPRO-202ENST00000348962 ZNF638Q14966 1978 aaKnown RBP13.48□□□□□ -0.25
PTPRO-202ENST00000348962 TRIM77I1YAP6 450 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 UBE2L3P68036 154 aaKnown RBP13.48□□□□□ -0.25
PTPRO-202ENST00000348962 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
PTPRO-202ENST00000348962 RPS4Y2Q8TD47 263 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 PIMREGQ9BSJ6 248 aa13.48□□□□□ -0.25
PTPRO-202ENST00000348962 CRHP06850 196 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 TEX30Q5JUR7 227 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 DTD1Q8TEA8 209 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 Q9N2K0 584 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 GSTZ1O43708 216 aaPredicted RBP13.47□□□□□ -0.25
PTPRO-202ENST00000348962 SLC6A1P30531 599 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 DGAT2L7PQ6IED9 249 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 FAM219AQ8IW50 185 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 A0A0U1RQV5 110 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 SOX15O60248 233 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 HSBP1O75506 76 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 ASAH2BP0C7U1 165 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 RAB5AP20339 215 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 PDPNQ86YL7 162 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 GAPTQ8N292 157 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 ZNF680Q8NEM1 530 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 CCL13Q99616 98 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 TMEM167BQ9NRX6 74 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 TECRQ9NZ01 308 aaKnown RBP13.47□□□□□ -0.25
PTPRO-202ENST00000348962 ANKRD20A5PA0PJZ0 165 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 RPL36A-HNRNPH2H7BZ11 118 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 RPS4Y1P22090 263 aaKnown RBP13.47□□□□□ -0.25
PTPRO-202ENST00000348962 NUBP1P53384 320 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 RIPPLY2Q5TAB7 128 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 OR10G4Q8NGN3 311 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 OR10G9Q8NGN4 311 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 OR10G7Q8NGN6 311 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 SPSB2Q99619 263 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 CCL28Q9NRJ3 127 aa13.47□□□□□ -0.25
PTPRO-202ENST00000348962 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 K7N7A8 449 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 CLDN14O95500 239 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 GAPDHP04406 335 aaKnown RBP13.46□□□□□ -0.25
PTPRO-202ENST00000348962 GNG4P50150 75 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 RPS4XP62701 263 aaKnown RBP13.46□□□□□ -0.25
PTPRO-202ENST00000348962 CLEC12BQ2HXU8 276 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 CEACAM21Q3KPI0 293 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 FAM209AQ5JX71 171 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 ATP1A1-AS1Q5TC04 95 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 PRSS54Q6PEW0 395 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 SCARF2Q96GP6 870 aaPredicted RBP13.46□□□□□ -0.25
PTPRO-202ENST00000348962 PLSCR3Q9NRY6 295 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 RTTNQ86VV8 2226 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 PTP4A3O75365 173 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 COL10A1Q03692 680 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 PCOLCEQ15113 449 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 RABAC1Q9UI14 185 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 RAB29O14966 203 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 DAOP14920 347 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 LTBRP36941 435 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 MVDP53602 400 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTPRO-202ENST00000348962 TAGLNQ01995 201 aaKnown RBP13.46□□□□□ -0.25
PTPRO-202ENST00000348962 PIGYQ3MUY2 71 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 ITLN1Q8WWA0 313 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 RHOFQ9HBH0 211 aa13.46□□□□□ -0.25
PTPRO-202ENST00000348962 CENPVL1A0A0U1RR11 272 aa13.46□□□□□ -0.26
PTPRO-202ENST00000348962 MPC2O95563 127 aa13.46□□□□□ -0.26
PTPRO-202ENST00000348962 FAM106CPP0CH98 169 aa13.46□□□□□ -0.26
PTPRO-202ENST00000348962 ZNF107Q9UII5 783 aaPredicted RBP13.46□□□□□ -0.26
PTPRO-202ENST00000348962 PITPNC1Q9UKF7 332 aa13.46□□□□□ -0.26
PTPRO-202ENST00000348962 WSB1Q9Y6I7 421 aa13.46□□□□□ -0.26
PTPRO-202ENST00000348962 IGKV3-7A0A075B6H7 116 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 DEFA6Q01524 100 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 PRSS50Q9UI38 385 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 LOC102723971A0A1B0GUV8 181 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 INPP5JQ15735 1006 aaPredicted RBP13.45□□□□□ -0.26
PTPRO-202ENST00000348962 OR4D10Q8NGI6 311 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 CHRNA10Q9GZZ6 450 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 FOXJ2Q9P0K8 574 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 INTS1Q8N201 2190 aaKnown RBP13.45□□□□□ -0.26
PTPRO-202ENST00000348962 WISP3O95389 354 aaPredicted RBP13.45□□□□□ -0.26
PTPRO-202ENST00000348962 GYPAP02724 150 aa13.45□□□□□ -0.26
PTPRO-202ENST00000348962 ARG1P05089 322 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms