RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ID4P47928 161 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 Q8IYB0 196 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 K7ESF4 209 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 SPINK14Q6IE38 97 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 SSX8Q7RTT4 187 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 POC1BQ8TC44 478 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 CCL28Q9NRJ3 127 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 TMEM38BQ9NVV0 291 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 RPL36A-HNRNPH2H7BZ11 118 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 M0R1B8 84 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 CCL2P13500 99 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 PRF1P14222 555 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 LIFP15018 202 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 UBE2G2P60604 165 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 FFAR4Q5NUL3 377 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 DHRS11Q6UWP2 260 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 MTCH1Q9NZJ7 389 aa12.84□□□□□ -0.35
NUP50-201ENST00000347635 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 KRASP01116 189 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 TMEM68Q96MH6 324 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 PRO1933Q9H354 126 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 SLC7A10Q9NS82 523 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 MGST1P10620 155 aaKnown RBP12.83□□□□□ -0.36
NUP50-201ENST00000347635 IL3RAP26951 378 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 WFDC8Q8IUA0 241 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 UBALD1Q8TB05 177 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 GUCD1Q96NT3 240 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 GPR27Q9NS67 375 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 NAT8Q9UHE5 227 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 MSGN1A6NI15 193 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 G3V3Q6 166 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 C1QL1O75973 258 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 SP1P08047 785 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 CCL3P10147 92 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 PPP1CBP62140 327 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 NUFIP2Q7Z417 695 aaKnown RBP12.83□□□□□ -0.36
NUP50-201ENST00000347635 SYNGR2O43760 224 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 RBM11P57052 281 aaKnown RBP12.83□□□□□ -0.36
NUP50-201ENST00000347635 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 C9orf152Q5JTZ5 239 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 ZNF383Q8NA42 475 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 OR2M7Q8NG81 312 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 BORCS7Q96B45 105 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 KIAA1456Q9P272 454 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 CACFD1Q9UGQ2 172 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 KNTC1P50748 2209 aa12.83□□□□□ -0.36
NUP50-201ENST00000347635 DUXBA0A1W2PPF3 345 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 TMEM30CPA0ZSE6 113 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 PRR33A8MZF0 331 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 MPV17LQ2QL34 196 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 TAAR3PQ9P1P4 343 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 CA6P23280 308 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 SOX8P57073 446 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 COL19A1Q14993 1142 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 GFRA3O60609 400 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 ZNF735P0CB33 412 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 FAM27BQ5VT28 67 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 TMEM37Q8WXS4 190 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 HIST1H2BAQ96A08 127 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 V9GYS6 101 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 ZNF708P17019 499 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
NUP50-201ENST00000347635 LNP1A1A4G5 178 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 DANCRP0C864 163 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 PACRGQ96M98 296 aaPredicted RBP12.81□□□□□ -0.36
NUP50-201ENST00000347635 TRAPPC1Q9Y5R8 145 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 YIF1AO95070 293 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 PTBP3O95758 552 aaKnown RBP12.81□□□□□ -0.36
NUP50-201ENST00000347635 FNDC7Q5VTL7 733 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 TMEM105Q8N8V8 129 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 SOX7Q9BT81 388 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 SLC25A22Q9H936 323 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 IGKV1D-43A0A0B4J1Z2 117 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 PLGLAQ15195 96 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 ZDHHC11Q9H8X9 412 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.81□□□□□ -0.36
NUP50-201ENST00000347635 CA11O75493 328 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 UBE2V2Q15819 145 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 KHDC3LQ587J8 217 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 OR10AD1Q8NGE0 317 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 ANGPTL4Q9BY76 406 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 VAX2Q9UIW0 290 aa12.81□□□□□ -0.36
NUP50-201ENST00000347635 IQCJQ1A5X6 159 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 OR10G4Q8NGN3 311 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 OR10G9Q8NGN4 311 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 OR10G7Q8NGN6 311 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 ESRP2Q9H6T0 727 aaKnown RBP12.8□□□□□ -0.36
NUP50-201ENST00000347635 OR5B21A6NL26 309 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 CYB561D1Q8N8Q1 229 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 GPR35Q9HC97 309 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 A0A1B0GU03 582 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 NGFP01138 241 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 RPS16P62249 146 aaKnown RBP12.8□□□□□ -0.36
NUP50-201ENST00000347635 Q96M66 194 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 TIMP4Q99727 224 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 TMEM222Q9H0R3 208 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 HSF4Q9ULV5 492 aa12.8□□□□□ -0.36
NUP50-201ENST00000347635 TRAF3IP2O43734 574 aaPredicted RBP12.8□□□□□ -0.36
NUP50-201ENST00000347635 ERVS71-1P61550 626 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms