RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 FAM180AQ6UWF9 173 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 ASCL4Q6XD76 172 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 CALHM1Q8IU99 346 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 PLPPR1Q8TBJ4 325 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 SPACA9Q96E40 222 aaPredicted RBP15.3■□□□□ 0.04
VHL-202ENST00000345392 MISP3Q96FF7 219 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 ADAMTS20P59510 1910 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 CEP192Q8TEP8 1941 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 SLC31A2O15432 143 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 HBE1P02100 147 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 SCTP09683 121 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 MMP9P14780 707 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 PAX9P55771 341 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 TAS2R30P59541 319 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 SRPXP78539 464 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 ID3Q02535 119 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 DAZAP2Q15038 168 aaPredicted RBP15.3■□□□□ 0.04
VHL-202ENST00000345392 EXT1Q16394 746 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 GUSBP11Q6P575 273 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 ATP5SQ99766 215 aa15.3■□□□□ 0.04
VHL-202ENST00000345392 HSPB6O14558 160 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 ZFP36L1Q07352 338 aaKnown RBP15.29■□□□□ 0.04
VHL-202ENST00000345392 TMEM267Q0VDI3 215 aaPredicted RBP15.29■□□□□ 0.04
VHL-202ENST00000345392 IZUMO4Q1ZYL8 232 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 RAET1LQ5VY80 246 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 CABLES2Q9BTV7 478 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 ZNF407Q9C0G0 2248 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 A0A1B0GU03 582 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 CD55P08174 381 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 RBM11P57052 281 aaKnown RBP15.29■□□□□ 0.04
VHL-202ENST00000345392 TLE1Q04724 770 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 NMSQ5H8A3 153 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 PLCXD3Q63HM9 321 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 ZNF385CQ66K41 422 aaPredicted RBP15.29■□□□□ 0.04
VHL-202ENST00000345392 TMEM211Q6ICI0 200 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 FOXL2NBQ6ZUU3 175 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 MAML2Q8IZL2 1156 aaPredicted RBP15.29■□□□□ 0.04
VHL-202ENST00000345392 CCL28Q9NRJ3 127 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 RPRMQ9NS64 109 aa15.29■□□□□ 0.04
VHL-202ENST00000345392 NCOR1O75376 2440 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 IGLV3-12A0A075B6K2 115 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 B4DEV8 164 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 SYNGR3O43761 229 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 ZNF468Q5VIY5 522 aaPredicted RBP15.28■□□□□ 0.04
VHL-202ENST00000345392 FAM27BQ5VT28 67 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 FADS6Q8N9I5 356 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 ZIC4Q8N9L1 334 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 DEFB126Q9BYW3 111 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 LRFN1Q9P244 771 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 CHCHD2Q9Y6H1 151 aaPredicted RBP15.28■□□□□ 0.04
VHL-202ENST00000345392 ZNHIT1O43257 154 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 CYB5R3P00387 301 aaPredicted RBP15.28■□□□□ 0.04
VHL-202ENST00000345392 CEACAM1P13688 526 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 TAS2R60P59551 318 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 ZNF92Q03936 586 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 SLC25A26Q70HW3 274 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 SSX7Q7RTT5 188 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 LILRB2Q8N423 598 aa15.28■□□□□ 0.04
VHL-202ENST00000345392 A0A0G2JRQ6 117 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 C9J4A7 227 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 B4GALT1P15291 398 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 VDAC1P21796 283 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 PLA2G5P39877 138 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 BAXQ07812 192 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 CADM4Q8NFZ8 388 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 OR1F12Q8NHA8 337 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 TAAR3PQ9P1P4 343 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 RNF115Q9Y4L5 304 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 CACNA1EQ15878 2313 aa15.27■□□□□ 0.04
VHL-202ENST00000345392 TK1P04183 234 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 SNRPCP09234 159 aaKnown RBP15.27■□□□□ 0.03
VHL-202ENST00000345392 RND2P52198 227 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 WDR25Q64LD2 544 aaPredicted RBP15.27■□□□□ 0.03
VHL-202ENST00000345392 ZNF787Q6DD87 383 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 WDR5BQ86VZ2 330 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 FAM185AQ8N0U4 392 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 ZNF611Q8N823 705 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 NECAP1Q8NC96 275 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 EXTL1Q92935 676 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 HS3ST6Q96QI5 342 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 PLSCR2Q9NRY7 297 aa15.27■□□□□ 0.03
VHL-202ENST00000345392 PI4KAP42356 2102 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 SLC22A20A6NK97 555 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 TNFSF11O14788 317 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 BCL2P10415 239 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 ZNF32P17041 273 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 NTF4P34130 210 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 MRPS34P82930 218 aaKnown RBP15.26■□□□□ 0.03
VHL-202ENST00000345392 RAB35Q15286 201 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 WDR74Q6RFH5 385 aaPredicted RBP15.26■□□□□ 0.03
VHL-202ENST00000345392 DBX2Q6ZNG2 339 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 OR4X1Q8NH49 305 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 SDF2L1Q9HCN8 221 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 CHD3Q12873 2000 aaKnown RBP15.26■□□□□ 0.03
VHL-202ENST00000345392 FRYQ5TBA9 3013 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 A0A1W2PQM1 296 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 CLN3Q13286 438 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 HERPUD1Q15011 391 aa15.26■□□□□ 0.03
VHL-202ENST00000345392 USF2Q15853 346 aaPredicted RBP15.26■□□□□ 0.03
VHL-202ENST00000345392 ZNF726P1Q15940 193 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms