RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 OCIAD1Q9NX40 245 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 NPTNQ9Y639 398 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 GRIFINA4D1Z8 144 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 H3BVH4 76 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 ISLRO14498 428 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 CA3P07451 260 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 SMAD4Q13485 552 aaKnown RBP10.64□□□□□ -0.71
COL12A1-202ENST00000345356 SPATA46Q5T0L3 261 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 VN1R4Q7Z5H5 301 aa10.64□□□□□ -0.71
COL12A1-202ENST00000345356 HSD17B10Q99714 261 aaKnown RBP10.64□□□□□ -0.71
COL12A1-202ENST00000345356 SMPD2O60906 423 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 GNG3P63215 75 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 ASB10Q8WXI3 467 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 P2RX4Q99571 388 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 PRSS27Q9BQR3 290 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 GNB4Q9HAV0 340 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF391Q9UJN7 358 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 PCM1Q15154 2024 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 CENPVL1A0A0U1RR11 272 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 A0A1B0GV72 72 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 B4E171 279 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 MT-ND6P03923 174 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 DUSP2Q05923 314 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 HES1Q14469 280 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF547Q8IVP9 402 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 ATOH7Q8N100 152 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 CXorf1O96002 111 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 CYB561P49447 251 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 PSMB2P49721 201 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 CSRP3P50461 194 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 EIF3IQ13347 325 aaKnown RBP10.63□□□□□ -0.71
COL12A1-202ENST00000345356 IGFBP7Q16270 282 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 DEFB108BQ8NET1 73 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 OR1L3Q8NH93 324 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 MTCH2Q9Y6C9 303 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 CD160O95971 181 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 HIKESHIQ53FT3 197 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 RFESDQ8TAC1 157 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 CISD1Q9NZ45 108 aaKnown RBP10.63□□□□□ -0.71
COL12A1-202ENST00000345356 SLC25A34Q6PIV7 304 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 RAB37Q96AX2 223 aa10.63□□□□□ -0.71
COL12A1-202ENST00000345356 TRIP11Q15643 1979 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 MEX3AA1L020 520 aaKnown RBP10.62□□□□□ -0.71
COL12A1-202ENST00000345356 SP1P08047 785 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 CAPZBP47756 277 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 NMUP48645 174 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 TNFRSF9Q07011 255 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 AGBL5Q8NDL9 886 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 NAT6Q93015 286 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 MRGPRX3Q96LB0 322 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 AGAP20933 346 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 BTCP35070 178 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 SRSF3P84103 164 aaKnown RBP10.62□□□□□ -0.71
COL12A1-202ENST00000345356 LINC00696Q6ZRV3 163 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 CARFQ8N187 725 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 OR4A4PQ8NGN8 299 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 MVB12AQ96EY5 273 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 SCN7AQ01118 1682 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 P01737 135 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 OPRK1P41145 380 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 MFAP2P55001 183 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 OR52L2PQ8NGH6 319 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 OR1N1Q8NGS0 311 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 ALKBH7Q9BT30 221 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-202ENST00000345356 C5orf66Q9H5L9 145 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 COA4Q9NYJ1 87 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 PHIPQ8WWQ0 1821 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 ALG1L2C9J202 215 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 HPRT1P00492 218 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 CA6P23280 308 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 PSG6Q00889 435 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 SMIM21Q3B7S5 101 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 OR8I2Q8N0Y5 310 aa10.62□□□□□ -0.71
COL12A1-202ENST00000345356 MSGN1A6NI15 193 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 FSTP19883 344 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 RPL11P62913 178 aaKnown RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 FNDC7Q5VTL7 733 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 AQP3Q92482 292 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 MENTQ9BUN1 341 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 OR2J1Q9GZK6 312 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 CXorf51AA0A1B0GTR3 108 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 IGHEP01854 428 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 PSG2P11465 335 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF137PP52743 207 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 GFERP55789 205 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 RPS23P62266 143 aaKnown RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 SAPCD1Q5SSQ6 148 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 Q8IYB0 196 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 AKIRIN1Q9H9L7 192 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 ZFP30Q9Y2G7 519 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 RNF222A6NCQ9 220 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 LRRC30A6NM36 301 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 HAND1O96004 215 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 PIGYQ3MUY2 71 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 SCGB1D4Q6XE38 83 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 OR2V1Q8NHB1 315 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 RNF133Q8WVZ7 376 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 SNRPCP09234 159 aaKnown RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF32P17041 273 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms