RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 C4orf17Q53FE4 359 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 ACY3Q96HD9 319 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 GRAMD2BQ96HH9 432 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 RNF122Q9H9V4 155 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 GPR27Q9NS67 375 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 HLA-DRB3P79483 266 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 SSX2Q16385 188 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 BMPERQ8N8U9 685 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 AICDAQ9GZX7 198 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 AKIP1Q9NQ31 210 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 AK3Q9UIJ7 227 aa14.21□□□□□ -0.13
SMARCA4-201ENST00000344626 NAA60Q9H7X0 242 aa14.21□□□□□ -0.14
SMARCA4-201ENST00000344626 MIOXQ9UGB7 285 aa14.21□□□□□ -0.14
SMARCA4-201ENST00000344626 MDFIC2A0A1B0GVS7 189 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 SH2D7A6NKC9 451 aaPredicted RBP14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 NDUFB6O95139 128 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 CPN1P15169 458 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 ZBTB34Q8NCN2 500 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 OR4A4PQ8NGN8 299 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 SFT2D1Q8WV19 159 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 SURF2Q15527 256 aaPredicted RBP14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 BTF3L4Q96K17 158 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 CCL13Q99616 98 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 RCL1Q9Y2P8 373 aaKnown RBP14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 KLHDC2Q9Y2U9 406 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 NPIPB9F8W1W9 429 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 HAX1O00165 279 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 SNAPINO95295 136 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 GYPAP02724 150 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 RBP4P02753 201 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 H2AFB1P0C5Y9 115 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 GFRA1P56159 465 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 RPS4XP62701 263 aaKnown RBP14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 MISP3Q96FF7 219 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 ZNF714Q96N38 554 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 SOX7Q9BT81 388 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 YAE1D1Q9NRH1 226 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 GOSR1O95249 250 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 SLC25A53Q5H9E4 307 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 NMES1Q9C002 83 aa14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 MTCL1Q9Y4B5 1905 aaKnown RBP14.2□□□□□ -0.14
SMARCA4-201ENST00000344626 DHRS7CA6NNS2 312 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 CDKN1AP38936 164 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 OR2B8PP59922 312 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 GLCCI1Q86VQ1 547 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 KLF14Q8TD94 323 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 MARS2Q96GW9 593 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 RAB40CQ96S21 281 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 TMPRSS13Q9BYE2 586 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 SLIRPQ9GZT3 109 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 SOCS1O15524 211 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 SFT2D2O95562 160 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 DAOP14920 347 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 OPRK1P41145 380 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 TNXAQ16473 311 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 BAK1Q16611 211 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 ACSM6Q6P461 480 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 WDYHV1Q96HA8 205 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 RASL12Q9NYN1 266 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 ST6GALNAC2Q9UJ37 374 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 ERVH48-1M5A8F1 160 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 RBM11P57052 281 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 RPS4Y2Q8TD47 263 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 PKIBQ9C010 78 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 TIMM9Q9Y5J7 89 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 ANK1P16157 1881 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 PLA2G5P39877 138 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 KIR3DL2P43630 455 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 IRF3Q14653 427 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 LHFPL6Q9Y693 200 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 CHD5Q8TDI0 1954 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 UBE2KP61086 200 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 BSPH1Q075Z2 132 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 NRN1LQ496H8 165 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 TMEM182Q6ZP80 229 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 NCCRP1Q6ZVX7 275 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 PTX4Q96A99 478 aa14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 ZNF629Q9UEG4 869 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-201ENST00000344626 FSTP19883 344 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 ZNF107Q9UII5 783 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 OR7C2O60412 319 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 TGFAP01135 160 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 PIGYQ3MUY2 71 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 SP6Q3SY56 376 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 WNT5BQ9H1J7 359 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 RAB18Q9NP72 206 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 CTSDP07339 412 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 MGST1P10620 155 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 GCSAMQ8N6F7 178 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 KDF1Q8NAX2 398 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 ZNF785A8K8V0 405 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 RAMP1O60894 148 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 CRYZL1O95825 349 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 NPBWR1P48145 328 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 FGF12P61328 243 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 EGR4Q05215 589 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 AESQ08117 197 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 PXDC1Q5TGL8 231 aa14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 FLYWCH2Q96CP2 140 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-201ENST00000344626 SNX22Q96L94 193 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms