RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PRSS58Q8IYP2 241 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 OR5D13Q8NGL4 314 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 PARD6GQ9BYG4 376 aaPredicted RBP8.32□□□□□ -1.08
HOXA1-201ENST00000343060 GAB2Q9UQC2 676 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 CHD9Q3L8U1 2897 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 A0A1B0GX78 115 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 TCRBV21S2A2A0A5A6 115 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 TMEM210A6NLX4 147 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 B4E171 279 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 TUSC2O75896 110 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 OR2J2O76002 312 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 CRYABP02511 175 aaKnown RBP8.32□□□□□ -1.08
HOXA1-201ENST00000343060 CD55P08174 381 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 GZMHP20718 246 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 TSPAN7P41732 249 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 TDGF1P3P51864 188 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 NUBP1P53384 320 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 RBM11P57052 281 aaKnown RBP8.32□□□□□ -1.08
HOXA1-201ENST00000343060 NCR3LG1Q68D85 454 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 SSX7Q7RTT5 188 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 CARFQ8N187 725 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 GPR137CQ8N3F9 429 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 SPTSSAQ969W0 71 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 Q9N2K0 584 aa8.32□□□□□ -1.08
HOXA1-201ENST00000343060 RALGAPA1Q6GYQ0 2036 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 KIAA1324LA8MWY0 1029 aaPredicted RBP8.31□□□□□ -1.08
HOXA1-201ENST00000343060 H0Y980 276 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 M0R143 59 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 KBTBD11O94819 623 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 IFNA1P01562 189 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 CLDN17P56750 224 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 ERVFC1-1P60608 527 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 MALLQ13021 153 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 ACOT6Q3I5F7 207 aaPredicted RBP8.31□□□□□ -1.08
HOXA1-201ENST00000343060 PHYHD1Q5SRE7 291 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 ZNF818PQ6ZRF7 136 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 NAXEQ8NCW5 288 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 OR2M3Q8NG83 312 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 TMEM18Q96B42 140 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 SLC7A10Q9NS82 523 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 LAMP3Q9UQV4 416 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 ZNF705GA8MUZ8 300 aaPredicted RBP8.31□□□□□ -1.08
HOXA1-201ENST00000343060 GGCTO75223 188 aaKnown RBP8.31□□□□□ -1.08
HOXA1-201ENST00000343060 HRASP01112 189 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 WNT2P09544 360 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 OR4A8P0C604 315 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 METTL15P1P0C7V9 234 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 TCN2P20062 427 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
HOXA1-201ENST00000343060 SERF2P84101 59 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 PAX5Q02548 391 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 KRTAP27-1Q3LI81 207 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 C1orf194Q5T5A4 169 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 BRICD5Q6PL45 260 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 BORCS8Q96FH0 119 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 KLHDC7BQ96G42 594 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 RAB40CQ96S21 281 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 KLRF1Q9NZS2 232 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 ST3GAL6Q9Y274 331 aa8.31□□□□□ -1.08
HOXA1-201ENST00000343060 IGHV3-20A0A0C4DH32 117 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A10PA6NDY2 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A18PA6NE21 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A16PA6NEW6 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A20PA6NIJ5 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A8PA6NJQ4 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A7PA6NKC0 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 MARCH11A6NNE9 402 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A22PA8MWA6 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A12PA8MX19 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A5PA8MXJ8 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A23PA8MXZ1 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A15PP0C7V4 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A13PP0C7W8 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A14PP0C7W9 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FAM90A24PP0C7X0 464 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 FGF5P12034 268 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 DRD1P21728 446 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 MDH2P40926 338 aaKnown RBP8.3□□□□□ -1.08
HOXA1-201ENST00000343060 GUCA1AP43080 201 aaPredicted RBP8.3□□□□□ -1.08
HOXA1-201ENST00000343060 GAGE1Q13065 139 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 SHHQ15465 462 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 TRIM61Q5EBN2 209 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 DCAF10Q5QP82 559 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 TEX38Q6PEX7 206 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 LCN15Q6UWW0 184 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 ZNF66Q6ZN08 573 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 GAPTQ8N292 157 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 ZNF525Q8N782 197 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 Q8NFD4 153 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 NAT6Q93015 286 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 RSG1Q9BU20 258 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 VSIRQ9H7M9 311 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 PRSS50Q9UI38 385 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 UNC80Q8N2C7 3258 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 SLC22A20A6NK97 555 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 CEBPZOSA8MTT3 80 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 TMEM250H0YL14 139 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 DHHO43323 396 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 GALR1P47211 349 aa8.3□□□□□ -1.08
HOXA1-201ENST00000343060 RPL23P62829 140 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms