RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ZNF708P17019 499 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 NDUFB7P17568 137 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 VAMP3Q15836 100 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 Q3ZCU0 254 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 HLA-CQ95604 372 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 MYOZ1Q9NP98 299 aaPredicted RBP12.95□□□□□ -0.34
RRP1B-201ENST00000340648 ARL2-SNX15V9GYD0 113 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 TET1Q8NFU7 2136 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 RAC3P60763 192 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 MRGPRGQ86SM5 289 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 CMTM2Q8TAZ6 248 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 ADIPOR1Q96A54 375 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 PSG11Q9UQ72 335 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 RP1P56715 2156 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 FCARP24071 287 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 SRSF3P84103 164 aaKnown RBP12.94□□□□□ -0.34
RRP1B-201ENST00000340648 C11orf94C9JXX5 98 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 FCGR3BO75015 233 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 HSBP1O75506 76 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 LYPD3O95274 346 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 PSG2P11465 335 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 TMEM183BQ1AE95 376 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 MYPOPQ86VE0 399 aaPredicted RBP12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CARFQ8N187 725 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 GPHA2Q96T91 129 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 GPR61Q9BZJ8 451 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 SMDT1Q9H4I9 107 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 PGA4P0DJD7 388 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 OR3A1P47881 315 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 SLC24A4Q8NFF2 622 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CADM4Q8NFZ8 388 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 RSG1Q9BU20 258 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 IL2RAP01589 272 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CT45A6P0DMU7 189 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CT45A5P0DMU8 189 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CT45A7P0DMV0 189 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 MDH2P40926 338 aaKnown RBP12.94□□□□□ -0.34
RRP1B-201ENST00000340648 FOXO1Q12778 655 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 SCGB2A2Q13296 93 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CXorf66Q5JRM2 361 aaPredicted RBP12.94□□□□□ -0.34
RRP1B-201ENST00000340648 BTNL3Q6UXE8 466 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 TMEM9BQ9NQ34 198 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 DOK5Q9P104 306 aa12.94□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF646O15015 1829 aaPredicted RBP12.93□□□□□ -0.34
RRP1B-201ENST00000340648 CCL3P10147 92 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 BCL2P10415 239 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 KLHDC1Q8N7A1 406 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 DHRS7CA6NNS2 312 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 PAGE4O60829 102 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 DANCRP0C864 163 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 LINC00114Q6XXX2 140 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 SCCPDHQ8NBX0 429 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 ACAA1P09110 424 aaPredicted RBP12.93□□□□□ -0.34
RRP1B-201ENST00000340648 C16orf82Q7Z2V1 217 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 Q8IYB0 196 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 APCDD1LQ8NCL9 501 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 MRPL30Q8TCC3 161 aaKnown RBP12.93□□□□□ -0.34
RRP1B-201ENST00000340648 OR2H1Q9GZK4 316 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 DYNLRB1Q9NP97 96 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 FKBP11Q9NYL4 201 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 CABIN1Q9Y6J0 2220 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 C5orf67F2Z3F1 127 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 FBP1P09467 338 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 SRD5A2P31213 254 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 CCKARP32238 428 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 CCL11P51671 97 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 RND3P61587 244 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 COL19A1Q14993 1142 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 HLA-BQ31612 363 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 SMIM21Q3B7S5 101 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 CISD2Q8N5K1 135 aaKnown RBP12.93□□□□□ -0.34
RRP1B-201ENST00000340648 VPS25Q9BRG1 176 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 LOXL2Q9Y4K0 774 aa12.93□□□□□ -0.34
RRP1B-201ENST00000340648 RLFQ13129 1914 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 A0A0U1RQV5 110 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 RBM11P57052 281 aaKnown RBP12.92□□□□□ -0.34
RRP1B-201ENST00000340648 AARDQ4LEZ3 155 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 CRISPLD2Q9H0B8 497 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 ZNF665Q9H7R5 613 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 MANBALQ9NQG1 85 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 PLA2G3Q9NZ20 509 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 KLF13Q9Y2Y9 288 aaPredicted RBP12.92□□□□□ -0.34
RRP1B-201ENST00000340648 SLC22A20A6NK97 555 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 NPIPB9F8W1W9 429 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 TGFBR3LH3BV60 316 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 CRYAAP02489 173 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 ALKBH6Q3KRA9 238 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 SPEM1Q8N4L4 309 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 ANAPC16Q96DE5 110 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 OR10AD1Q8NGE0 317 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 A0A1B0GTI1 187 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 CHEK1O14757 476 aa12.92□□□□□ -0.34
RRP1B-201ENST00000340648 H1FOOQ8IZA3 346 aaPredicted RBP12.92□□□□□ -0.34
RRP1B-201ENST00000340648 MRGPRDQ8TDS7 321 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms