RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C1QTNF9P0C862 333 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 ZNF823P16415 610 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 IGFBP3P17936 291 aaPredicted RBP13.04□□□□□ -0.32
BRAT1-201ENST00000340611 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
BRAT1-201ENST00000340611 UBE2KP61086 200 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 RAB1AP62820 205 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 TMEM123Q8N131 208 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 C17orf78Q8N4C9 275 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 RBMXL3Q8N7X1 1067 aaKnown RBP13.04□□□□□ -0.32
BRAT1-201ENST00000340611 SUMF2Q8NBJ7 301 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 AQP3Q92482 292 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 ZDHHC11Q9H8X9 412 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 RAB22AQ9UL26 194 aa13.04□□□□□ -0.32
BRAT1-201ENST00000340611 FAM87AP0C7U9 286 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 IRF2P14316 349 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 PAX5Q02548 391 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 PNLIPRP3Q17RR3 467 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 FDX2Q6P4F2 183 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 ZDHHC22Q8N966 263 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 RAB39BQ96DA2 213 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 SLC35B3Q9H1N7 401 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 CNTD2Q9H8S5 307 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 SLC2A8Q9NY64 477 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 POLR1DQ9Y2S0 133 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 COL6A6A6NMZ7 2263 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 H0YL77 283 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 METTL15P1P0C7V9 234 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 SERPINA2P20848 420 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 NPY4RP50391 375 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 DNLZQ5SXM8 178 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 AAED1Q7RTV5 226 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 CATSPERDQ86XM0 798 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 GCNT2Q8N0V5 402 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 HSD17B11Q8NBQ5 300 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 LPAR2Q9HBW0 351 aa13.03□□□□□ -0.32
BRAT1-201ENST00000340611 INTS1Q8N201 2190 aaKnown RBP13.03□□□□□ -0.32
BRAT1-201ENST00000340611 P2RY10O00398 339 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 RER1O15258 196 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 CHATP28329 748 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 CAMLGP49069 296 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 GAGE1Q13065 139 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 RAB32Q13637 225 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 SLC25A47Q6Q0C1 308 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 FAM185AQ8N0U4 392 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 THRSPQ92748 146 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 URM1Q9BTM9 101 aaKnown RBP13.02□□□□□ -0.32
BRAT1-201ENST00000340611 HHLA2Q9UM44 414 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 RCL1Q9Y2P8 373 aaKnown RBP13.02□□□□□ -0.32
BRAT1-201ENST00000340611 STARD10Q9Y365 291 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.32
BRAT1-201ENST00000340611 CD37P11049 281 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 UNC119Q13432 240 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 ABLIM2Q6H8Q1 611 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 ZNF283Q8N7M2 679 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 ULBP2Q9BZM5 246 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 SLC5A7Q9GZV3 580 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 LHFPL6Q9Y693 200 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 NPIPB13A6NJU9 1138 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 NPIPB4C9JG80 1138 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 HIST3H3Q16695 136 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 AADACL3Q5VUY0 350 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 PEG10Q86TG7 708 aaKnown RBP13.02□□□□□ -0.33
BRAT1-201ENST00000340611 OR10S1Q8NGN2 331 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 SVIPQ8NHG7 77 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 SPACA5Q96QH8 159 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 TMED3Q9Y3Q3 217 aa13.02□□□□□ -0.33
BRAT1-201ENST00000340611 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 H3BQ15 152 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 DVL1O14640 695 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 DFFBO76075 338 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 VAMP5O95183 116 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 SCGB1D1O95968 90 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 KCTD18Q6PI47 426 aaPredicted RBP13.01□□□□□ -0.33
BRAT1-201ENST00000340611 OR52N4Q8NGI2 321 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 FGGYQ96C11 551 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 PPIAL4AQ9Y536 164 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 ARHGAP21Q5T5U3 1957 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 NXPH2O95156 264 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 B4GALT1P15291 398 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 TBR1Q16650 682 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 TSPO2Q5TGU0 170 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 RPUSD3Q6P087 351 aaKnown RBP13.01□□□□□ -0.33
BRAT1-201ENST00000340611 DNM1P34Q6PK57 102 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 RNF144BQ7Z419 303 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 ZNF101Q8IZC7 436 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 C11orf42Q8N5U0 333 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 NICN1Q9BSH3 213 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 METTL8Q9H825 291 aaKnown RBP13.01□□□□□ -0.33
BRAT1-201ENST00000340611 ACACBO00763 2458 aa13.01□□□□□ -0.33
BRAT1-201ENST00000340611 TRBV6-7A0A0A0MS04 114 aa13□□□□□ -0.33
BRAT1-201ENST00000340611 SYNGR4O95473 234 aa13□□□□□ -0.33
BRAT1-201ENST00000340611 UCP3P55916 312 aa13□□□□□ -0.33
BRAT1-201ENST00000340611 ERVFC1-1P60608 527 aa13□□□□□ -0.33
BRAT1-201ENST00000340611 DLK1P80370 383 aa13□□□□□ -0.33
BRAT1-201ENST00000340611 NUFIP2Q7Z417 695 aaKnown RBP13□□□□□ -0.33
BRAT1-201ENST00000340611 OR4K15Q8NH41 348 aa13□□□□□ -0.33
BRAT1-201ENST00000340611 OR10C1Q96KK4 312 aa13□□□□□ -0.33
BRAT1-201ENST00000340611 ZNF107Q9UII5 783 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms