RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 TMEM108Q6UXF1 575 aa12.73□□□□□ -0.37
RET-201ENST00000340058 HOGA1Q86XE5 327 aa12.73□□□□□ -0.37
RET-201ENST00000340058 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
RET-201ENST00000340058 C9orf172C9J069 976 aa12.73□□□□□ -0.37
RET-201ENST00000340058 RNASEK-C17orf49H0YIS7 233 aa12.73□□□□□ -0.37
RET-201ENST00000340058 TOX4O94842 621 aa12.73□□□□□ -0.37
RET-201ENST00000340058 HAND1O96004 215 aa12.73□□□□□ -0.37
RET-201ENST00000340058 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
RET-201ENST00000340058 CST4P01036 141 aa12.73□□□□□ -0.37
RET-201ENST00000340058 PMELP40967 661 aa12.73□□□□□ -0.37
RET-201ENST00000340058 ENDOGQ14249 297 aaKnown RBP12.73□□□□□ -0.37
RET-201ENST00000340058 TEX30Q5JUR7 227 aa12.73□□□□□ -0.37
RET-201ENST00000340058 GUCD1Q96NT3 240 aa12.73□□□□□ -0.37
RET-201ENST00000340058 DEPPQ9NTK1 212 aa12.73□□□□□ -0.37
RET-201ENST00000340058 OR5AC2Q9NZP5 309 aa12.73□□□□□ -0.37
RET-201ENST00000340058 A0A1W2PNV4 684 aa12.73□□□□□ -0.37
RET-201ENST00000340058 APELAP0DMC3 54 aa12.73□□□□□ -0.37
RET-201ENST00000340058 SLC25A4P12235 298 aa12.73□□□□□ -0.37
RET-201ENST00000340058 ZNF154Q13106 437 aa12.73□□□□□ -0.37
RET-201ENST00000340058 MPPED2Q15777 294 aa12.73□□□□□ -0.37
RET-201ENST00000340058 AVPI1Q5T686 147 aa12.73□□□□□ -0.37
RET-201ENST00000340058 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
RET-201ENST00000340058 Q8IYB0 196 aa12.73□□□□□ -0.37
RET-201ENST00000340058 PLXNA3P51805 1871 aa12.72□□□□□ -0.37
RET-201ENST00000340058 TRDCB7Z8K6 153 aa12.72□□□□□ -0.37
RET-201ENST00000340058 ERVH48-1M5A8F1 160 aa12.72□□□□□ -0.37
RET-201ENST00000340058 ISG15P05161 165 aa12.72□□□□□ -0.37
RET-201ENST00000340058 SLC25A6P12236 298 aa12.72□□□□□ -0.37
RET-201ENST00000340058 FGF7P21781 194 aa12.72□□□□□ -0.37
RET-201ENST00000340058 S100A12P80511 92 aa12.72□□□□□ -0.37
RET-201ENST00000340058 EFNB1P98172 346 aa12.72□□□□□ -0.37
RET-201ENST00000340058 DHODHQ02127 395 aa12.72□□□□□ -0.37
RET-201ENST00000340058 LIAT1Q6ZQX7 453 aa12.72□□□□□ -0.37
RET-201ENST00000340058 OR5A2Q8NGI9 324 aa12.72□□□□□ -0.37
RET-201ENST00000340058 WNT2BQ93097 391 aa12.72□□□□□ -0.37
RET-201ENST00000340058 BOD1Q96IK1 185 aa12.72□□□□□ -0.37
RET-201ENST00000340058 TIMP4Q99727 224 aa12.72□□□□□ -0.37
RET-201ENST00000340058 HMSDA8MTL9 139 aa12.72□□□□□ -0.37
RET-201ENST00000340058 LEUTXA8MZ59 168 aa12.72□□□□□ -0.37
RET-201ENST00000340058 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
RET-201ENST00000340058 CD1AP06126 327 aa12.72□□□□□ -0.37
RET-201ENST00000340058 C2orf68Q2NKX9 166 aa12.72□□□□□ -0.37
RET-201ENST00000340058 ADAMTS17Q8TE56 1095 aa12.72□□□□□ -0.37
RET-201ENST00000340058 ZNF705FA8MVS1 300 aaPredicted RBP12.72□□□□□ -0.37
RET-201ENST00000340058 TRIM77I1YAP6 450 aa12.72□□□□□ -0.37
RET-201ENST00000340058 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
RET-201ENST00000340058 SNRPCP09234 159 aaKnown RBP12.72□□□□□ -0.37
RET-201ENST00000340058 ZNF705DP0CH99 300 aaPredicted RBP12.72□□□□□ -0.37
RET-201ENST00000340058 ZNF705BP0CI00 300 aaPredicted RBP12.72□□□□□ -0.37
RET-201ENST00000340058 FOXG1P55316 489 aaPredicted RBP12.72□□□□□ -0.37
RET-201ENST00000340058 GUK1Q16774 197 aa12.72□□□□□ -0.37
RET-201ENST00000340058 CA5BP1Q8WTZ4 195 aa12.72□□□□□ -0.37
RET-201ENST00000340058 DDA1Q9BW61 102 aa12.72□□□□□ -0.37
RET-201ENST00000340058 C19orf12Q9NSK7 152 aa12.72□□□□□ -0.37
RET-201ENST00000340058 PLCE1Q9P212 2302 aa12.72□□□□□ -0.37
RET-201ENST00000340058 KPTNQ9Y664 436 aa12.72□□□□□ -0.37
RET-201ENST00000340058 A8MXE2 369 aa12.71□□□□□ -0.37
RET-201ENST00000340058 NPIPB7O75200 414 aa12.71□□□□□ -0.37
RET-201ENST00000340058 OR2C1O95371 312 aa12.71□□□□□ -0.37
RET-201ENST00000340058 DTYMKP23919 212 aa12.71□□□□□ -0.37
RET-201ENST00000340058 ERVS71-1P61550 626 aa12.71□□□□□ -0.37
RET-201ENST00000340058 NHLH2Q02577 135 aa12.71□□□□□ -0.37
RET-201ENST00000340058 KIAA0141Q14154 515 aaPredicted RBP12.71□□□□□ -0.37
RET-201ENST00000340058 MOB3BQ86TA1 216 aa12.71□□□□□ -0.37
RET-201ENST00000340058 SLC25A22Q9H936 323 aa12.71□□□□□ -0.37
RET-201ENST00000340058 CYB5BO43169 146 aa12.71□□□□□ -0.37
RET-201ENST00000340058 FAM3AP98173 230 aa12.71□□□□□ -0.37
RET-201ENST00000340058 EIF2S3LQ2VIR3 472 aaKnown RBP12.71□□□□□ -0.37
RET-201ENST00000340058 ZNF552Q9H707 407 aaPredicted RBP12.71□□□□□ -0.37
RET-201ENST00000340058 OSGIN2Q9Y236 505 aa12.71□□□□□ -0.37
RET-201ENST00000340058 PRR14LQ5THK1 2151 aa12.71□□□□□ -0.37
RET-201ENST00000340058 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.38
RET-201ENST00000340058 TNFRSF1AP19438 455 aa12.71□□□□□ -0.38
RET-201ENST00000340058 PLAURQ03405 335 aa12.71□□□□□ -0.38
RET-201ENST00000340058 SMIM7Q9BQ49 75 aa12.71□□□□□ -0.38
RET-201ENST00000340058 CXXC4Q9H2H0 198 aa12.71□□□□□ -0.38
RET-201ENST00000340058 PRR19A6NJB7 356 aa12.7□□□□□ -0.38
RET-201ENST00000340058 SFTA3P0C7M3 94 aa12.7□□□□□ -0.38
RET-201ENST00000340058 REG1BP48304 166 aa12.7□□□□□ -0.38
RET-201ENST00000340058 GMPPAQ96IJ6 420 aaPredicted RBP12.7□□□□□ -0.38
RET-201ENST00000340058 ABHD14BQ96IU4 210 aa12.7□□□□□ -0.38
RET-201ENST00000340058 HELZP42694 1942 aaKnown RBP12.7□□□□□ -0.38
RET-201ENST00000340058 NDUFB3O43676 98 aa12.7□□□□□ -0.38
RET-201ENST00000340058 PSG2P11465 335 aa12.7□□□□□ -0.38
RET-201ENST00000340058 UCP2P55851 309 aa12.7□□□□□ -0.38
RET-201ENST00000340058 PLAC9Q5JTB6 97 aa12.7□□□□□ -0.38
RET-201ENST00000340058 TIMD4Q96H15 378 aa12.7□□□□□ -0.38
RET-201ENST00000340058 PATZ1Q9HBE1 687 aaKnown RBP12.7□□□□□ -0.38
RET-201ENST00000340058 IGF2RP11717 2491 aa12.7□□□□□ -0.38
RET-201ENST00000340058 hCG_1809904A0A1W2PP81 198 aa12.7□□□□□ -0.38
RET-201ENST00000340058 A0A1W2PPE2 198 aa12.7□□□□□ -0.38
RET-201ENST00000340058 A0A1W2PR64 198 aa12.7□□□□□ -0.38
RET-201ENST00000340058 A0A1W2PRV1 198 aa12.7□□□□□ -0.38
RET-201ENST00000340058 PINLYPA6NC86 204 aa12.7□□□□□ -0.38
RET-201ENST00000340058 FAM157AC9JC47 383 aa12.7□□□□□ -0.38
RET-201ENST00000340058 ANKRD55Q3KP44 614 aa12.7□□□□□ -0.38
RET-201ENST00000340058 FGF11Q92914 225 aa12.7□□□□□ -0.38
RET-201ENST00000340058 DYNLT3P51808 116 aa12.69□□□□□ -0.38
RET-201ENST00000340058 RUNX1Q01196 453 aa12.69□□□□□ -0.38
RET-201ENST00000340058 PJVKQ0ZLH3 352 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms