RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SLC35B1P78383 322 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 MGAT2Q10469 447 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 ELAVL3Q14576 367 aaKnown RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 PMVKQ15126 192 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 FCRL6Q6DN72 434 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 SLC22A24Q8N4F4 322 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 C8orf46Q8TAG6 207 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 NEUROG1Q92886 237 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 TMEM204Q9BSN7 226 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 PECRQ9BY49 303 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 ANAPC10Q9UM13 185 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 KLHDC2Q9Y2U9 406 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 ECM29Q5VYK3 1845 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 SSC5DA1L4H1 1573 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 ADAM20O43506 726 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 TNFP01375 233 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 IGHG4P01861 327 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 DRD3P35462 400 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 SUMO3P55854 103 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 RPS16P62249 146 aaKnown RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 FKBP1AP62942 108 aaKnown RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF260Q3ZCT1 412 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 UFSP1Q6NVU6 142 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 LRRC75AQ8NAA5 344 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 CLEC4CQ8WTT0 213 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 NUDT8Q8WV74 236 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 GPA33Q99795 319 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 PIMREGQ9BSJ6 248 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF160Q9HCG1 818 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 KLK13Q9UKR3 277 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 MYH8P13535 1937 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 PPIAL4EA0A075B759 164 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 TEX50A0A1B0GTY4 177 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 LOC102725191A0A1B0GVB3 256 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 ZFP92A6NM28 416 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 PPIAL4DF5H284 164 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 RER1O15258 196 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 GYPAP02724 150 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 PPIAL4FP0DN26 164 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 NKX2-1P43699 371 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 CTXN3Q4LDR2 81 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 Q6ZS92 163 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 SMIM20Q8N5G0 67 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 BLNKQ8WV28 456 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 LHX4Q969G2 390 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 LSM10Q969L4 123 aaKnown RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 OR2A5Q96R48 311 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 LMF2Q9BU23 707 aaKnown RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 TMEM70Q9BUB7 260 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 GNB1LQ9BYB4 327 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 NKX2-4Q9H2Z4 354 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 PELI2Q9HAT8 420 aa3.62□□□□□ -1.83
NEDD4-201ENST00000338963 TSSC4Q9Y5U2 329 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-201ENST00000338963 KIDINS220Q9ULH0 1771 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 IGLON5A6NGN9 336 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 C3orf80F5H4A9 247 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 HMGN4O00479 90 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 TMPRSS2O15393 492 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 SYNGR1O43759 233 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF324O75467 553 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 HLA-DOBP13765 273 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 GCSHP23434 173 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 HRH1P35367 487 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 RPL23P62829 140 aaKnown RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 KLRD1Q13241 179 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 FAM69BQ5VUD6 431 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 EMC9Q9Y3B6 208 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 HCFC2Q9Y5Z7 792 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF737O75373 536 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 UBE2G1P62253 170 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 RPL32P62910 135 aaKnown RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 FUT5Q11128 374 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 EXOSC7Q15024 291 aaKnown RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 MPV17L2Q567V2 206 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF324BQ6AW86 544 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 Q6ZSR6 202 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 C16orf70Q9BSU1 422 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 C1QTNF4Q9BXJ3 329 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 DECR2Q9NUI1 292 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ODAMA1E959 279 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 OOEPA6NGQ2 149 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 FCN3O75636 299 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ISG15P05161 165 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 CT45A10P0DMU9 189 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ARFRP1Q13795 201 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 EEF1DP3Q658K8 133 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 WBP2NLQ6ICG8 309 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 RASL11AQ6T310 242 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 PARM1Q6UWI2 310 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 GLB1LQ6UWU2 654 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 PAQR9Q6ZVX9 377 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 RAB42Q8N4Z0 105 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 OR5P3Q8WZ94 311 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 VN1R3Q9BXE9 311 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 PARP12Q9H0J9 701 aaKnown RBP3.61□□□□□ -1.83
NEDD4-201ENST00000338963 A0A1B0GV50 99 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 DCDC2BA2VCK2 349 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 LRRC30A6NM36 301 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 F8WDY8 70 aa3.61□□□□□ -1.83
NEDD4-201ENST00000338963 ZNF728P0DKX0 622 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms