RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 CEACAM19Q7Z692 300 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 ABHD12Q8N2K0 398 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 WFDC12Q8WWY7 111 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 UFD1Q92890 307 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 TMEM203Q969S6 136 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 S100A13Q99584 98 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 UQCC2Q9BRT2 126 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 CCDC90BQ9GZT6 254 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 BEX1Q9HBH7 125 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
PRKN-201ENST00000338468 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
PRKN-201ENST00000338468 A0A087X0M5 115 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 TRAV39A0A0B4J263 110 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 A0A1B0GUS0 222 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 A0A1B0GX30 115 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 FAM172BPA6NC97 362 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 CHST1O43916 411 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 TSPAN9O75954 239 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 IGLV1-47P01700 117 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 HSMCR30P0CW71 290 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 CPEP16870 476 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 GLP1RP43220 463 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 RAB13P51153 203 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 MLLT11Q13015 90 aaPredicted RBP12.31□□□□□ -0.44
PRKN-201ENST00000338468 GPR176Q14439 515 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 MINOS1Q5TGZ0 78 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 OLFML2AQ68BL7 652 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 DHRS7BQ6IAN0 325 aaPredicted RBP12.31□□□□□ -0.44
PRKN-201ENST00000338468 CCBE1Q6UXH8 406 aaPredicted RBP12.31□□□□□ -0.44
PRKN-201ENST00000338468 PHYHIPQ92561 330 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 FOXRED1Q96CU9 486 aaPredicted RBP12.31□□□□□ -0.44
PRKN-201ENST00000338468 MRPS24Q96EL2 167 aaKnown RBP12.31□□□□□ -0.44
PRKN-201ENST00000338468 KIRREL1Q96J84 757 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 MGLLQ99685 303 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 BARHL1Q9BZE3 327 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 SLITRK2Q9H156 845 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 BANF2Q9H503 90 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 C16orf95Q9H693 158 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 PCDHB16Q9NRJ7 776 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 CALYQ9NYX4 217 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 MINOS1-NBL1R4GNA1 71 aa12.31□□□□□ -0.44
PRKN-201ENST00000338468 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 SRMP19623 302 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 PROK1P58294 105 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 TBCEQ15813 527 aaPredicted RBP12.3□□□□□ -0.44
PRKN-201ENST00000338468 FAM189A2Q15884 450 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 HSD17B12Q53GQ0 312 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 C1orf100Q5SVJ3 147 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 SLC35E4Q6ICL7 350 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 OR52W1Q6IF63 320 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 RTN4RL2Q86UN3 420 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 MRGPRDQ8TDS7 321 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 Q96M66 194 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 GFI1Q99684 422 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 TCF7L1Q9HCS4 588 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 HILPDAQ9Y5L2 63 aa12.3□□□□□ -0.44
PRKN-201ENST00000338468 DENRO43583 198 aaKnown RBP12.29□□□□□ -0.44
PRKN-201ENST00000338468 IL1AP01583 271 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 MGMTP16455 207 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 SSTR5P35346 364 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 DYNLT3P51808 116 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 SSX1Q16384 188 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 ATAD3CQ5T2N8 411 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 ZNF497Q6ZNH5 498 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 ZNF565Q8N9K5 539 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 ACOT13Q9NPJ3 140 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 TCF19Q9Y242 345 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 RNF114Q9Y508 228 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 VWFP04275 2813 aa12.29□□□□□ -0.44
PRKN-201ENST00000338468 CMYA5Q8N3K9 4069 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 TMEM30CPA0ZSE6 113 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 A6NDX4 124 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 LY6LH3BQJ8 138 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 C15orf65H3BRN8 121 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 CRTAPO75718 401 aaPredicted RBP12.28□□□□□ -0.44
PRKN-201ENST00000338468 MT-ND4P03905 459 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 HTR1DP28221 377 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 FABP5Q01469 135 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 OR10K2Q6IF99 312 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 RFESDQ8TAC1 157 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 LEAP2Q969E1 77 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 FAM46BQ96A09 425 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 KCNK15Q9H427 330 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 IDI2-AS1Q9NZ38 188 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 DPM3Q9P2X0 92 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 BLOC1S6Q9UL45 172 aa12.28□□□□□ -0.44
PRKN-201ENST00000338468 FAM90A10PA6NDY2 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A18PA6NE21 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A16PA6NEW6 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A20PA6NIJ5 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A7PA6NKC0 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A22PA8MWA6 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A12PA8MX19 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A5PA8MXJ8 464 aa12.27□□□□□ -0.45
PRKN-201ENST00000338468 FAM90A23PA8MXZ1 464 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms