RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SH3BGRL2Q9UJC5 107 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 ERRFI1Q9UJM3 462 aaPredicted RBP7.53□□□□□ -1.2
SNCA-201ENST00000336904 KCNS2Q9ULS6 477 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 RBM7Q9Y580 266 aaKnown RBP7.53□□□□□ -1.2
SNCA-201ENST00000336904 ZGRF1Q86YA3 2104 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 A0A0G2JRQ6 117 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 ZNF724A8MTY0 619 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 MPPED1O15442 326 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 RRP8O43159 456 aaKnown RBP7.53□□□□□ -1.2
SNCA-201ENST00000336904 OR8U9P0C7N5 309 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 FAM157CP0CG43 387 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 NFYBP25208 207 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 MST1LQ2TV78 715 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 LIAT1Q6ZQX7 453 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 HSD17B13Q7Z5P4 300 aaPredicted RBP7.53□□□□□ -1.2
SNCA-201ENST00000336904 FAM58AQ8N1B3 248 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 TMEM178AQ8NBL3 297 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 SCCPDHQ8NBX0 429 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 OR8U1Q8NH10 309 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 MARC2Q969Z3 335 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 LOXL4Q96JB6 756 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 TSNAXQ99598 290 aaKnown RBP7.53□□□□□ -1.2
SNCA-201ENST00000336904 ABHD14AQ9BUJ0 271 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 TLNRD1Q9H1K6 362 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 CDH20Q9HBT6 801 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 EDARQ9UNE0 448 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 ATRXP46100 2492 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 CSMD1Q96PZ7 3565 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 TRBV6-7A0A0A0MS04 114 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 F8W036 122 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 HSPA12AO43301 675 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TK1P04183 234 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 BLOC1S1P78537 153 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TLE1Q04724 770 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 CHD3Q12873 2000 aaKnown RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 ZNF154Q13106 437 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 ARL6IP1Q15041 203 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 Q6ZRG5 221 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 DPPA2Q7Z7J5 298 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 ZNF695Q8IW36 515 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 MRPL30Q8TCC3 161 aaKnown RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 AQP10Q96PS8 301 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TAAR6Q96RI8 345 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 RNF122Q9H9V4 155 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 DLL3Q9NYJ7 618 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 MEMO1Q9Y316 297 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TPRP12270 2363 aaKnown RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 SVEP1Q4LDE5 3571 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 IGHV3-43A0A0B4J1X8 118 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TUBAL3A6NHL2 446 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 DEGS1O15121 323 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 ATXN7O15265 892 aaPredicted RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 SMPD2O60906 423 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 WDR1O75083 606 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 NXPH2O95156 264 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 IGHV3-43DP0DP04 118 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 MUC1P15941 1255 aaPredicted RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 CD80P33681 288 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 PSG7Q13046 419 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 PUSL1Q8N0Z8 303 aaKnown RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 DCTN5Q9BTE1 182 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 C20orf24Q9BUV8 137 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 METRNQ9UJH8 293 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TLN1Q9Y490 2541 aaKnown RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 DEFB108AA8MXU0 73 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 KRBOX1C9JBD0 128 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 LINC01387J3KSC0 135 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TOR1AO14656 332 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 CEBPGP53567 150 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 GNG3P63215 75 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 RUNX1Q01196 453 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 SURF2Q15527 256 aaPredicted RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 TBC1D28Q2M2D7 210 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 ZNF808Q8N4W9 903 aaPredicted RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 LILRB1Q8NHL6 650 aaPredicted RBP7.52□□□□□ -1.21
SNCA-201ENST00000336904 RFESDQ8TAC1 157 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 ASB13Q8WXK3 278 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 SYT3Q9BQG1 590 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 ZNF391Q9UJN7 358 aa7.52□□□□□ -1.21
SNCA-201ENST00000336904 TM4SF5O14894 197 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 SLC34A2O95436 690 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 OR2H2O95918 312 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 NAPSAO96009 420 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 PSG2P11465 335 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 ZNF14P17017 642 aaPredicted RBP7.51□□□□□ -1.21
SNCA-201ENST00000336904 NPBWR1P48145 328 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 SPRNQ5BIV9 151 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 RTL6Q6ICC9 239 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 TMEM211Q6ICI0 200 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 TMEM182Q6ZP80 229 aaPredicted RBP7.51□□□□□ -1.21
SNCA-201ENST00000336904 ZNF610Q8N9Z0 462 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 OR5A2Q8NGI9 324 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 RNASE11Q8TAA1 199 aaKnown RBP7.51□□□□□ -1.21
SNCA-201ENST00000336904 ZDHHC11Q9H8X9 412 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 IL36GQ9NZH8 169 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 DUSP13Q9UII6 198 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 TRAPPC2LQ9UL33 140 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 CDRT15L2A8MXV6 281 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms