RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 SEC11BP0C7V7 166 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 CTRB1P17538 263 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 NPBWR1P48145 328 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 CTRB2Q6GPI1 263 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 TMPRSS7Q7RTY8 843 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 LINC00596Q86U02 117 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 CBLN2Q8IUK8 224 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 FAM58AQ8N1B3 248 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 NANOS1Q8WY41 292 aaKnown RBP17.46■□□□□ 0.39
LINC01006-201ENST00000333319 GINS3Q9BRX5 216 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 TRAV24A0A0B4J272 114 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 CD5P06127 495 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 SFTA3P0C7M3 94 aa17.46■□□□□ 0.39
LINC01006-201ENST00000333319 RIMS4Q9H426 269 aaPredicted RBP17.46■□□□□ 0.39
LINC01006-201ENST00000333319 MED12LQ86YW9 2145 aa17.46■□□□□ 0.38
LINC01006-201ENST00000333319 IL24Q13007 206 aa17.45■□□□□ 0.38
LINC01006-201ENST00000333319 LYPD6BQ8NI32 183 aa17.45■□□□□ 0.38
LINC01006-201ENST00000333319 SPP1P10451 314 aa17.45■□□□□ 0.38
LINC01006-201ENST00000333319 NKX2-1P43699 371 aaPredicted RBP17.45■□□□□ 0.38
LINC01006-201ENST00000333319 ASCL1P50553 236 aa17.45■□□□□ 0.38
LINC01006-201ENST00000333319 POLR2GP62487 172 aaKnown RBP eCLIP17.45■□□□□ 0.38
LINC01006-201ENST00000333319 PCSK4Q6UW60 755 aa17.45■□□□□ 0.38
LINC01006-201ENST00000333319 LILRB1Q8NHL6 650 aaPredicted RBP17.45■□□□□ 0.38
LINC01006-201ENST00000333319 GTF3AQ92664 365 aaKnown RBP17.45■□□□□ 0.38
LINC01006-201ENST00000333319 BOD1Q96IK1 185 aa17.45■□□□□ 0.38
LINC01006-201ENST00000333319 OR51I2Q9H344 312 aa17.45■□□□□ 0.38
LINC01006-201ENST00000333319 FAM24AA6NFZ4 105 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 C9JQL5 133 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 ADAM20O43506 726 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 TNFSF12O43508 249 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 ZNF806P0C7X5 589 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 DANCRP0C864 163 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 EWSR1Q01844 656 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC01006-201ENST00000333319 OR2C3Q8N628 320 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 HSD17B11Q8NBQ5 300 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 SH3BGRL3Q9H299 93 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 A0A1W2PR80 420 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 TSPAN15O95858 294 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 DVL1P1P54792 670 aaPredicted RBP17.44■□□□□ 0.38
LINC01006-201ENST00000333319 PMP22Q01453 160 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 ZNF616Q08AN1 781 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 FAM76BQ5HYJ3 339 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 DHRS7BQ6IAN0 325 aaPredicted RBP17.44■□□□□ 0.38
LINC01006-201ENST00000333319 MYPOPQ86VE0 399 aaPredicted RBP17.44■□□□□ 0.38
LINC01006-201ENST00000333319 CMTM1Q8IZ96 169 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 TMEM178AQ8NBL3 297 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 SPIN2AQ99865 258 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 SPIN2BQ9BPZ2 258 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 PKIBQ9C010 78 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 C11orf1Q9H5F2 150 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 GP6Q9HCN6 339 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 DLL3Q9NYJ7 618 aa17.44■□□□□ 0.38
LINC01006-201ENST00000333319 CELA3BP08861 270 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 ZNF44P15621 663 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 FHITP49789 147 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 TBC1D28Q2M2D7 210 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 MIDNQ504T8 468 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 KIRREL1Q96J84 757 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 MAGT1Q9H0U3 335 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 ZDHHC11Q9H8X9 412 aa17.43■□□□□ 0.38
LINC01006-201ENST00000333319 UCP1P25874 307 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 CXorf66Q5JRM2 361 aaPredicted RBP17.42■□□□□ 0.38
LINC01006-201ENST00000333319 TRBV6-6A0A0A6YYG2 114 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 DEGS1O15121 323 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 C1QL1O75973 258 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 PVALBP20472 110 aaPredicted RBP17.42■□□□□ 0.38
LINC01006-201ENST00000333319 CAMLGP49069 296 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 P4HA3Q7Z4N8 544 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 OR10J5Q8NHC4 309 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 LUZP4Q9P127 313 aa17.42■□□□□ 0.38
LINC01006-201ENST00000333319 J3QT63 122 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 SSSCA1O60232 199 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 PGLYRP1O75594 196 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-201ENST00000333319 PRH1P02810 166 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 H2AFB1P0C5Y9 115 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 TRIP6Q15654 476 aaKnown RBP17.41■□□□□ 0.38
LINC01006-201ENST00000333319 NMSQ5H8A3 153 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 CACFD1Q9UGQ2 172 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 IGSF23A1L1A6 192 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 FAM157AC9JC47 383 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 ZNF14P17017 642 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-201ENST00000333319 VDAC1P21796 283 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 NFYBP25208 207 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 HLA-DRB3P79483 266 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 CLINT1Q14677 625 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 ZNF324BQ6AW86 544 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-201ENST00000333319 ZNF880Q6PDB4 577 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 GMPPAQ96IJ6 420 aaPredicted RBP17.41■□□□□ 0.38
LINC01006-201ENST00000333319 AIFM2Q9BRQ8 373 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 OR2J1Q9GZK6 312 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 NDRG3Q9UGV2 375 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 OR2W1Q9Y3N9 320 aa17.41■□□□□ 0.38
LINC01006-201ENST00000333319 OMGP23515 440 aa17.4■□□□□ 0.38
LINC01006-201ENST00000333319 SNCAP37840 140 aa17.4■□□□□ 0.38
LINC01006-201ENST00000333319 WDR86Q86TI4 376 aa17.4■□□□□ 0.38
LINC01006-201ENST00000333319 GCNT2Q8N0V5 402 aa17.4■□□□□ 0.38
LINC01006-201ENST00000333319 IL1F10Q8WWZ1 152 aa17.4■□□□□ 0.38
LINC01006-201ENST00000333319 AKR1E2Q96JD6 320 aa17.4■□□□□ 0.38
LINC01006-201ENST00000333319 RTL8AQ9BWD3 113 aa17.4■□□□□ 0.38
LINC01006-201ENST00000333319 ERRFI1Q9UJM3 462 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms