RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CTXN2P0C2S0 81 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 GNRHRP30968 328 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 HTR2BP41595 481 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 KLF3P57682 345 aaPredicted RBP14.29□□□□□ -0.12
DDX41-201ENST00000330503 TMEM187Q14656 261 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 SP6Q3SY56 376 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 GALNT14Q96FL9 552 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 USB1Q9BQ65 265 aaKnown RBP14.29□□□□□ -0.12
DDX41-201ENST00000330503 MFFQ9GZY8 342 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 IGKV1D-13A0A0B4J2D9 117 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 POM121CA8CG34 1229 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 TFF1P04155 84 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 IGKV1-13P0DP09 117 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 HLA-DRB3P79483 266 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 IL15RAQ13261 267 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 OR4A4PQ8NGN8 299 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 LILRB4Q8NHJ6 448 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 RNF126Q9BV68 326 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 MRPL37Q9BZE1 423 aaKnown RBP14.29□□□□□ -0.12
DDX41-201ENST00000330503 METTL8Q9H825 291 aaKnown RBP14.29□□□□□ -0.12
DDX41-201ENST00000330503 TNFSF18Q9UNG2 199 aa14.29□□□□□ -0.12
DDX41-201ENST00000330503 DIRAS3O95661 229 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 C1QTNF9P0C862 333 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 C4BPBP20851 252 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 PSMB6P28072 239 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 CYCSP99999 105 aaKnown RBP14.28□□□□□ -0.12
DDX41-201ENST00000330503 MZT1Q08AG7 82 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 CHD3Q12873 2000 aaKnown RBP14.28□□□□□ -0.12
DDX41-201ENST00000330503 ATXN7L3Q14CW9 347 aaPredicted RBP14.28□□□□□ -0.12
DDX41-201ENST00000330503 FIP1L1Q6UN15 594 aaKnown RBP14.28□□□□□ -0.12
DDX41-201ENST00000330503 RND1Q92730 232 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 VKORC1Q9BQB6 163 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 KCNIP3Q9Y2W7 256 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 WIPI2Q9Y4P8 454 aa14.28□□□□□ -0.12
DDX41-201ENST00000330503 TRBV6-7A0A0A0MS04 114 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 DPRXA6NFQ7 191 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 OR5AC1P0C628 307 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 LDLRAD3Q86YD5 345 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 WFDC8Q8IUA0 241 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 PRR7Q8TB68 274 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 LRRC29Q8WV35 223 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 C2orf50Q96LR7 162 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 CABLES2Q9BTV7 478 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 ARL6Q9H0F7 186 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 TAAR3PQ9P1P4 343 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 PCDHB10Q9UN67 800 aa14.27□□□□□ -0.12
DDX41-201ENST00000330503 hCG_1807616A0A1W2PRN6 198 aa14.27□□□□□ -0.13
DDX41-201ENST00000330503 H0YIZ8 118 aa14.27□□□□□ -0.13
DDX41-201ENST00000330503 H7C1Q1 480 aa14.27□□□□□ -0.13
DDX41-201ENST00000330503 KLRB1Q12918 225 aa14.27□□□□□ -0.13
DDX41-201ENST00000330503 EXOSC2Q13868 293 aaKnown RBP14.27□□□□□ -0.13
DDX41-201ENST00000330503 MBNL3Q9NUK0 354 aaKnown RBP14.27□□□□□ -0.13
DDX41-201ENST00000330503 METRNQ9UJH8 293 aa14.27□□□□□ -0.13
DDX41-201ENST00000330503 MEMO1Q9Y316 297 aa14.27□□□□□ -0.13
DDX41-201ENST00000330503 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.26□□□□□ -0.13
DDX41-201ENST00000330503 EGR1P18146 543 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 AP2S1P53680 142 aaPredicted RBP14.26□□□□□ -0.13
DDX41-201ENST00000330503 RPS23P62266 143 aaKnown RBP14.26□□□□□ -0.13
DDX41-201ENST00000330503 H1FOOQ8IZA3 346 aaPredicted RBP14.26□□□□□ -0.13
DDX41-201ENST00000330503 GLYATL2Q8WU03 294 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 SECTM1Q8WVN6 248 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 MRPL24Q96A35 216 aaKnown RBP14.26□□□□□ -0.13
DDX41-201ENST00000330503 KIRREL1Q96J84 757 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 MEGF10Q96KG7 1140 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 MBD2Q9UBB5 411 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 GLS2Q9UI32 602 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 PCNX1Q96RV3 2341 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 ERVH48-1M5A8F1 160 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 MPPED1O15442 326 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 SPRY3O43610 288 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 TMEM108Q6UXF1 575 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 ZNF818PQ6ZRF7 136 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 MOB1BQ7L9L4 216 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 NUP37Q8NFH4 326 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 THAP6Q8TBB0 222 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 MSI2Q96DH6 328 aaKnown RBP14.26□□□□□ -0.13
DDX41-201ENST00000330503 OR2V2Q96R30 315 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 SLC5A7Q9GZV3 580 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 TRAPPC2LQ9UL33 140 aa14.26□□□□□ -0.13
DDX41-201ENST00000330503 TRGV8A0A0C4DH27 118 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 RNF222A6NCQ9 220 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 PTAFRP25105 342 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 CFHR2P36980 270 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 RND3P61587 244 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 GGNBP1Q5YKI7 109 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 LIAT1Q6ZQX7 453 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 KCNRGQ8N5I3 272 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 CD177Q8N6Q3 437 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 LRTM2Q8N967 370 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 CCDC71LQ8N9Z2 235 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 OR10Z1Q8NGY1 313 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 C18orf12Q96KH6 178 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 SUCNR1Q9BXA5 334 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 CCL28Q9NRJ3 127 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 OR1A1Q9P1Q5 309 aa14.25□□□□□ -0.13
DDX41-201ENST00000330503 SRRM5B3KS81 715 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 NPIPB11E5RHQ5 1161 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 IFNL4K9M1U5 179 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 ATXN7O15265 892 aaPredicted RBP14.24□□□□□ -0.13
DDX41-201ENST00000330503 KCNAB3O43448 404 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms