RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 MTCH1Q9NZJ7 389 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 HMGB3O15347 200 aaKnown RBP11.25□□□□□ -0.61
CLGN-201ENST00000325617 TOX3O15405 576 aaPredicted RBP11.25□□□□□ -0.61
CLGN-201ENST00000325617 OR2C1O95371 312 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 SEC11BP0C7V7 166 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 IAPPP10997 89 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 STARD6P59095 220 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 RPS23P62266 143 aaKnown RBP11.25□□□□□ -0.61
CLGN-201ENST00000325617 CYB561D1Q8N8Q1 229 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 OR4D5Q8NGN0 318 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 OR1K1Q8NGR3 316 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 LYPD6BQ8NI32 183 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 MGAQ8IWI9 3026 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 DMXL2Q8TDJ6 3036 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 PQLC2LA1A4F0 135 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 LRRC3CA6NJW4 275 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 ZNF732B4DXR9 585 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 TFF1P04155 84 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 PRDX4Q13162 271 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 SPSB3Q6PJ21 355 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 DPPA2Q7Z7J5 298 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 TUSC5Q8IXB3 177 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 SELENOHQ8IZQ5 122 aaKnown RBP11.25□□□□□ -0.61
CLGN-201ENST00000325617 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 DUSP23Q9BVJ7 150 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 SUCNR1Q9BXA5 334 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
CLGN-201ENST00000325617 SPTBN2O15020 2390 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 SLC22A20A6NK97 555 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 K7N7A8 449 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 CNOT4O95628 575 aaKnown RBP11.24□□□□□ -0.61
CLGN-201ENST00000325617 MT-ND4LP03901 98 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 CXCL1P09341 107 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 FUT6P51993 359 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 VAMP2P63027 116 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 CLEC12BQ2HXU8 276 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 C4orf17Q53FE4 359 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 GFI1BQ5VTD9 330 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 STX12Q86Y82 276 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 CA5BP1Q8WTZ4 195 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 RBMXL1Q96E39 390 aaKnown RBP11.24□□□□□ -0.61
CLGN-201ENST00000325617 RSG1Q9BU20 258 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 ARV1Q9H2C2 271 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 MIOXQ9UGB7 285 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 CST2P09228 141 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 DTYMKP23919 212 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 NDUFA6P56556 154 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 OR2Y1Q8NGV0 311 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 POMT1Q9Y6A1 747 aa11.24□□□□□ -0.61
CLGN-201ENST00000325617 TGIF2-C20orf24A0A0A6YYL0 155 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 H3BQ15 152 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 RHBDL1O75783 438 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 NR2C1P13056 603 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 FOLR3P41439 243 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 NUBP1P53384 320 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 Q6ZRM9 215 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 TIPARPQ7Z3E1 657 aaKnown RBP11.23□□□□□ -0.61
CLGN-201ENST00000325617 THNSL2Q86YJ6 484 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 RAB39BQ96DA2 213 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 TMEM222Q9H0R3 208 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 PCED1AQ9H1Q7 454 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 C12orf49Q9H741 205 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 PCSK5Q92824 1860 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 A0A087WZY1 265 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 ZNF816-ZNF321PA0A0X1KG74 233 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 FGF5P12034 268 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 AGAP20933 346 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
CLGN-201ENST00000325617 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 LCN15Q6UWW0 184 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 OR1A1Q9P1Q5 309 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 DMXL1Q9Y485 3027 aa11.23□□□□□ -0.61
CLGN-201ENST00000325617 RBFOX3A6NFN3 312 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 ZFP92A6NM28 416 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 S100A9P06702 114 aaKnown RBP11.22□□□□□ -0.61
CLGN-201ENST00000325617 ZXDAP98168 799 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 MPV17LQ2QL34 196 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 OR2B11Q5JQS5 317 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 TMEM42Q69YG0 159 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 LINC00696Q6ZRV3 163 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 ZNF561Q8N587 486 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 OR2V1Q8NHB1 315 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 CPNE4Q96A23 557 aaPredicted RBP11.22□□□□□ -0.61
CLGN-201ENST00000325617 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 SH2D2AQ9NP31 389 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 PPP1R3CQ9UQK1 317 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 BDP1A6H8Y1 2624 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 HEATR1Q9H583 2144 aaKnown RBP11.22□□□□□ -0.61
CLGN-201ENST00000325617 MRPL33O75394 65 aaKnown RBP11.22□□□□□ -0.61
CLGN-201ENST00000325617 MMP7P09237 267 aaPredicted RBP11.22□□□□□ -0.61
CLGN-201ENST00000325617 C9orf152Q5JTZ5 239 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 PPP1R32Q7Z5V6 425 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
CLGN-201ENST00000325617 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 SIGLEC12Q96PQ1 595 aa11.22□□□□□ -0.61
CLGN-201ENST00000325617 ERRFI1Q9UJM3 462 aaPredicted RBP11.22□□□□□ -0.61
CLGN-201ENST00000325617 TK1P04183 234 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms