RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 RUNX1Q01196 453 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF90Q03938 601 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 RYDENQ9NUL5 291 aaKnown RBP12.81□□□□□ -0.36
TCOF1-201ENST00000323668 SCN8AQ9UQD0 1980 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 UBE2G2P60604 165 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 RPS16P62249 146 aaKnown RBP12.81□□□□□ -0.36
TCOF1-201ENST00000323668 FFAR4Q5NUL3 377 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF468Q5VIY5 522 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-201ENST00000323668 NSUN5P2Q63ZY6 315 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM68Q96MH6 324 aa12.81□□□□□ -0.36
TCOF1-201ENST00000323668 A0A1B0GU03 582 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 H0YIZ8 118 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 SPINK2P20155 84 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 OR5A2Q8NGI9 324 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 KLHDC3Q9BQ90 382 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 ESRP2Q9H6T0 727 aaKnown RBP12.8□□□□□ -0.36
TCOF1-201ENST00000323668 IGLV3-19P01714 112 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 FHITP49789 147 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 UBALD2Q8IYN6 164 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 HIST1H2BAQ96A08 127 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 SLC25A22Q9H936 323 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 ZDBF2Q9HCK1 2354 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 RALGAPA1Q6GYQ0 2036 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 F6UZH7 168 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 MLF1P58340 268 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 BSXQ3C1V8 233 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-201ENST00000323668 CYB561D1Q8N8Q1 229 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 SMIM8Q96KF7 97 aa12.8□□□□□ -0.36
TCOF1-201ENST00000323668 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-201ENST00000323668 F8VVB4 439 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 F8VWA3 439 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 RPS2P15880 293 aaKnown RBP12.79□□□□□ -0.36
TCOF1-201ENST00000323668 PPP1CCP36873 323 aaKnown RBP12.79□□□□□ -0.36
TCOF1-201ENST00000323668 CXorf66Q5JRM2 361 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-201ENST00000323668 STPG1Q5TH74 334 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 SPINK14Q6IE38 97 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 MRPL13Q9BYD1 178 aaKnown RBP12.79□□□□□ -0.36
TCOF1-201ENST00000323668 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 FGF16O43320 207 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 GALR1P47211 349 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 TLE1Q04724 770 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM187Q14656 261 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 ZNF718Q3SXZ3 478 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 TUSC5Q8IXB3 177 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 C17orf78Q8N4C9 275 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 SPSB2Q99619 263 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 TCFL5Q9UL49 500 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 PQLC2LA1A4F0 135 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 MRGPRFQ96AM1 343 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
TCOF1-201ENST00000323668 SMIM21Q3B7S5 101 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 C9orf152Q5JTZ5 239 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 C10orf128Q5T292 105 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 OR10G4Q8NGN3 311 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 OR10G9Q8NGN4 311 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 OR10G7Q8NGN6 311 aa12.79□□□□□ -0.36
TCOF1-201ENST00000323668 LDLRAD4O15165 306 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 RRP8O43159 456 aaKnown RBP12.78□□□□□ -0.36
TCOF1-201ENST00000323668 EIF3GO75821 320 aaKnown RBP eCLIP12.78□□□□□ -0.36
TCOF1-201ENST00000323668 F2RP25116 425 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 ATP6V1FQ16864 119 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 BTNL8Q6UX41 500 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 MRGPRGQ86SM5 289 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 RFESDQ8TAC1 157 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 TM2D1Q9BX74 207 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 G3V3Q6 166 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 YIF1AO95070 293 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 CCL11P51671 97 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 OR4A4PQ8NGN8 299 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM9BQ9NQ34 198 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 NAT8Q9UHE5 227 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 CACNA1EQ15878 2313 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 S1PR3Q99500 378 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 SCTP09683 121 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 MMP9P14780 707 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 OR3A1P47881 315 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 THBS3P49746 956 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 CORO2AQ92828 525 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM147Q9BVK8 224 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 SH3BGRL3Q9H299 93 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 CACNA1DQ01668 2161 aa12.78□□□□□ -0.36
TCOF1-201ENST00000323668 TIAF1O95411 115 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 KCNMB1Q16558 191 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 ASPHD2Q6ICH7 369 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 CXorf67Q86X51 503 aaPredicted RBP12.77□□□□□ -0.36
TCOF1-201ENST00000323668 H1FOOQ8IZA3 346 aaPredicted RBP12.77□□□□□ -0.36
TCOF1-201ENST00000323668 POC1BQ8TC44 478 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 MGST1P10620 155 aaKnown RBP12.77□□□□□ -0.36
TCOF1-201ENST00000323668 PAX6P26367 422 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 SUCLG1P53597 346 aaKnown RBP12.77□□□□□ -0.36
TCOF1-201ENST00000323668 FGF12P61328 243 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 PPP1CBP62140 327 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 TMEM230Q96A57 120 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 ABHD14BQ96IU4 210 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 OR2D2Q9H210 308 aa12.77□□□□□ -0.36
TCOF1-201ENST00000323668 PRO1933Q9H354 126 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms