RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 MMP16P51512 607 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 CLDN12P56749 244 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 SURF2Q15527 256 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-201ENST00000322507 MAVSQ7Z434 540 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 MRGPRDQ8TDS7 321 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 HSD17B8Q92506 261 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 MTCH2Q9Y6C9 303 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 P01737 135 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 PVRP15151 417 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 PPP1CCP36873 323 aaKnown RBP8.67□□□□□ -1.02
COL12A1-201ENST00000322507 TAS1R1Q7RTX1 841 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 GPR84Q9NQS5 396 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 WNK3Q9BYP7 1800 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 SPANXN5Q5MJ07 72 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 SHISA6Q6ZSJ9 500 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 LINC00346Q8IVM7 164 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
COL12A1-201ENST00000322507 PLSCR3Q9NRY6 295 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF257Q9Y2Q1 563 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 ATP5LO75964 103 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM50AO95807 157 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 LRRC10Q5BKY1 277 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF687Q8N1G0 1237 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 SLC37A2Q8TED4 501 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 SRD5A3Q9H8P0 318 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 TAS2R4Q9NYW5 299 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 SLC17A4Q9Y2C5 497 aa8.67□□□□□ -1.02
COL12A1-201ENST00000322507 HSPB6O14558 160 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 SP9P0CG40 484 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 HRH1P35367 487 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 NPEPL1Q8NDH3 523 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 OR4F17Q8NGA8 305 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF764Q96H86 408 aaPredicted RBP8.66□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM30CPA0ZSE6 113 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 DSCR4P56555 118 aaPredicted RBP8.66□□□□□ -1.02
COL12A1-201ENST00000322507 OR1L4Q8NGR5 311 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 PDFQ9HBH1 243 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 LRP5O75197 1615 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 MED12LQ86YW9 2145 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 C11orf94C9JXX5 98 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 CDIPTO14735 213 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 FUT7Q11130 342 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 ANKRD33Q7Z3H0 272 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 PFN4Q8NHR9 129 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 Q96M85 177 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 TXNDC17Q9BRA2 123 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 IDSB3KWA1 339 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 FGF2P09038 288 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 IL13RA2Q14627 380 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 ZBTB25P24278 435 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 CD300LDQ6UXZ3 194 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 OR52I2Q8NH67 350 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 HLA-GP17693 338 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 H1FXQ92522 213 aaKnown RBP8.66□□□□□ -1.02
COL12A1-201ENST00000322507 ATP6V0BQ99437 205 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 OR1F12Q8NHA8 337 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 TSPAN32Q96QS1 320 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 FPR2P25090 351 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 OSR2Q8N2R0 312 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 SH2D2AQ9NP31 389 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 DUSP13Q9UII6 198 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 UFC1Q9Y3C8 167 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 TRBV5-4A0A0C4DH59 114 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF815PA8K554 130 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM65Q6PI78 240 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 OVOL2Q9BRP0 275 aa8.66□□□□□ -1.02
COL12A1-201ENST00000322507 FCMRO60667 390 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 SMIM18P0DKX4 95 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 COA3Q9Y2R0 106 aaPredicted RBP8.65□□□□□ -1.02
COL12A1-201ENST00000322507 AMMECR1Q9Y4X0 333 aaPredicted RBP8.65□□□□□ -1.02
COL12A1-201ENST00000322507 PCNX1Q96RV3 2341 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 PUSL1Q8N0Z8 303 aaKnown RBP8.65□□□□□ -1.02
COL12A1-201ENST00000322507 OR4X2Q8NGF9 303 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 OR51E1Q8TCB6 317 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 PPP6CO00743 305 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 DCTDP32321 178 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 TMEM33P57088 247 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 PAQR9Q6ZVX9 377 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.65□□□□□ -1.02
COL12A1-201ENST00000322507 ERGIC1Q969X5 290 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 PBOV1Q9GZY1 135 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 MMP17Q9ULZ9 603 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 SLC17A2O00624 439 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 HOXC4P09017 264 aaPredicted RBP8.65□□□□□ -1.02
COL12A1-201ENST00000322507 INHBBP09529 407 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 RAB9AP51151 201 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 MICBQ29980 383 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 MRGPRGQ86SM5 289 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 ZNF511Q8NB15 262 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 AICDAQ9GZX7 198 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 GLRX2Q9NS18 164 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 ARFGEF3Q5TH69 2177 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 HS3ST1O14792 307 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 IGLV3-25P01717 112 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 STAC2Q6ZMT1 411 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 UBR3Q6ZT12 1888 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 H3BQ15 152 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 NTHL1P78549 312 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 RPL18Q07020 188 aaKnown RBP8.65□□□□□ -1.02
COL12A1-201ENST00000322507 CLEC2AQ6UVW9 174 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms